ID A0A061E6X7_THECC Unreviewed; 516 AA.
AC A0A061E6X7;
DT 03-SEP-2014, integrated into UniProtKB/TrEMBL.
DT 03-SEP-2014, sequence version 1.
DT 27-MAR-2024, entry version 43.
DE SubName: Full=Pentatricopeptide repeat superfamily protein isoform 1 {ECO:0000313|EMBL:EOY00681.1};
GN ORFNames=TCM_010606 {ECO:0000313|EMBL:EOY00681.1};
OS Theobroma cacao (Cacao) (Cocoa).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Theobroma.
OX NCBI_TaxID=3641 {ECO:0000313|EMBL:EOY00681.1, ECO:0000313|Proteomes:UP000026915};
RN [1] {ECO:0000313|EMBL:EOY00681.1, ECO:0000313|Proteomes:UP000026915}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Matina 1-6 {ECO:0000313|Proteomes:UP000026915};
RX PubMed=23731509; DOI=10.1186/gb-2013-14-6-r53;
RA Motamayor J.C., Mockaitis K., Schmutz J., Haiminen N., Iii D.L.,
RA Cornejo O., Findley S.D., Zheng P., Utro F., Royaert S., Saski C.,
RA Jenkins J., Podicheti R., Zhao M., Scheffler B.E., Stack J.C., Feltus F.A.,
RA Mustiga G.M., Amores F., Phillips W., Marelli J.P., May G.D., Shapiro H.,
RA Ma J., Bustamante C.D., Schnell R.J., Main D., Gilbert D., Parida L.,
RA Kuhn D.N.;
RT "The genome sequence of the most widely cultivated cacao type and its use
RT to identify candidate genes regulating pod color.";
RL Genome Biol. 14:R53.1-R53.24(2013).
CC -!- SIMILARITY: Belongs to the PPR family. P subfamily.
CC {ECO:0000256|ARBA:ARBA00007626}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; CM001880; EOY00680.1; -; Genomic_DNA.
DR EMBL; CM001880; EOY00681.1; -; Genomic_DNA.
DR EMBL; CM001880; EOY00682.1; -; Genomic_DNA.
DR EMBL; CM001880; EOY00683.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A061E6X7; -.
DR STRING; 3641.A0A061E6X7; -.
DR EnsemblPlants; EOY00680; EOY00680; TCM_010606.
DR EnsemblPlants; EOY00681; EOY00681; TCM_010606.
DR EnsemblPlants; EOY00682; EOY00682; TCM_010606.
DR EnsemblPlants; EOY00683; EOY00683; TCM_010606.
DR Gramene; EOY00680; EOY00680; TCM_010606.
DR Gramene; EOY00681; EOY00681; TCM_010606.
DR Gramene; EOY00682; EOY00682; TCM_010606.
DR Gramene; EOY00683; EOY00683; TCM_010606.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_002706_49_0_1; -.
DR InParanoid; A0A061E6X7; -.
DR OMA; KVWDQMM; -.
DR Proteomes; UP000026915; Chromosome 2.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 4.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 10.
DR PANTHER; PTHR47941:SF22; PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 2, MITOCHONDRIAL-RELATED; 1.
DR PANTHER; PTHR47941; PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 3, MITOCHONDRIAL; 1.
DR Pfam; PF01535; PPR; 3.
DR Pfam; PF13041; PPR_2; 4.
DR SUPFAM; SSF81901; HCP-like; 1.
DR PROSITE; PS51375; PPR; 10.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000026915};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT REPEAT 113..147
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 148..182
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 219..253
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 254..288
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 289..320
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 324..358
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 359..393
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 394..428
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 429..463
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 464..498
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
SQ SEQUENCE 516 AA; 57858 MW; 97AC4EE922F1CDA7 CRC64;
MYHALGAPRL IYRAHISRLV KNGLTNQAIS MFDQMTQSDC RVFGLDYNRF IGVLLRDSRF
DLAEYYYFQM FPQGFSLTPF TYSRFISALC PVKNFNFIEL LLNDMDKLNY VPDIWAFNIY
LNLLCREKKI ELALEVFHSL VKKGRDPDVV TYTIMIDGLC KAGKFDNAVG FWREMVGKGF
RPDNKACCAL VVGLCDGGKV DLAYELVVEV IKGGDIEFST LLYNALISGF CRIRRIDKAQ
AIKLFMTKNG CEPDLVTYNV LLNYCCNELM LEEAAKLVKK MERSGIGPDV YGYNQMIKGF
CNANRPDKAL LLMVNKMEAN GLADAVSHNT IIKAFCKGGH IGKAYKLFEE MGRKGIAPDV
VTFTTLIKAC LTEGSSDIAK ALLDRMSGMG LLPDCIFYTA IIDHLCKNGK VEMAHSVFDD
MIKQGVNPDV VSYNALINGF CKSNRASEAI HLYEEMQTRG FSPDEVTFKL IIGGLIREKK
LSKACKVWDQ MMEKGFTLDG AVSETLINAI HSVDSG
//
