ID A0A061F0P4_THECC Unreviewed; 1260 AA.
AC A0A061F0P4;
DT 03-SEP-2014, integrated into UniProtKB/TrEMBL.
DT 03-SEP-2014, sequence version 1.
DT 27-MAR-2024, entry version 53.
DE SubName: Full=Transcription factor jumonji family protein / zinc finger family protein isoform 1 {ECO:0000313|EMBL:EOY10915.1};
GN ORFNames=TCM_026189 {ECO:0000313|EMBL:EOY10915.1};
OS Theobroma cacao (Cacao) (Cocoa).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Theobroma.
OX NCBI_TaxID=3641 {ECO:0000313|EMBL:EOY10915.1, ECO:0000313|Proteomes:UP000026915};
RN [1] {ECO:0000313|EMBL:EOY10915.1, ECO:0000313|Proteomes:UP000026915}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Matina 1-6 {ECO:0000313|Proteomes:UP000026915};
RX PubMed=23731509; DOI=10.1186/gb-2013-14-6-r53;
RA Motamayor J.C., Mockaitis K., Schmutz J., Haiminen N., Iii D.L.,
RA Cornejo O., Findley S.D., Zheng P., Utro F., Royaert S., Saski C.,
RA Jenkins J., Podicheti R., Zhao M., Scheffler B.E., Stack J.C., Feltus F.A.,
RA Mustiga G.M., Amores F., Phillips W., Marelli J.P., May G.D., Shapiro H.,
RA Ma J., Bustamante C.D., Schnell R.J., Main D., Gilbert D., Parida L.,
RA Kuhn D.N.;
RT "The genome sequence of the most widely cultivated cacao type and its use
RT to identify candidate genes regulating pod color.";
RL Genome Biol. 14:R53.1-R53.24(2013).
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; CM001883; EOY10915.1; -; Genomic_DNA.
DR EMBL; CM001883; EOY10916.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A061F0P4; -.
DR STRING; 3641.A0A061F0P4; -.
DR EnsemblPlants; EOY10915; EOY10915; TCM_026189.
DR EnsemblPlants; EOY10916; EOY10916; TCM_026189.
DR Gramene; EOY10915; EOY10915; TCM_026189.
DR Gramene; EOY10916; EOY10916; TCM_026189.
DR eggNOG; KOG1246; Eukaryota.
DR InParanoid; A0A061F0P4; -.
DR OMA; NSSHGIK; -.
DR Proteomes; UP000026915; Chromosome 5.
DR GO; GO:0000785; C:chromatin; IBA:GO_Central.
DR GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR GO; GO:0034647; F:histone H3K4me/H3K4me2/H3K4me3 demethylase activity; IBA:GO_Central.
DR GO; GO:0006338; P:chromatin remodeling; IBA:GO_Central.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:UniProt.
DR GO; GO:0010468; P:regulation of gene expression; IBA:GO_Central.
DR GO; GO:0022414; P:reproductive process; IEA:UniProt.
DR GO; GO:0048731; P:system development; IEA:UniProt.
DR Gene3D; 3.30.160.360; -; 1.
DR Gene3D; 2.60.120.650; Cupin; 1.
DR InterPro; IPR003889; FYrich_C.
DR InterPro; IPR003888; FYrich_N.
DR InterPro; IPR003347; JmjC_dom.
DR InterPro; IPR003349; JmjN.
DR InterPro; IPR004198; Znf_C5HC2.
DR PANTHER; PTHR10694; LYSINE-SPECIFIC DEMETHYLASE; 1.
DR PANTHER; PTHR10694:SF113; PROTEIN JUMONJI; 1.
DR Pfam; PF05965; FYRC; 1.
DR Pfam; PF05964; FYRN; 1.
DR Pfam; PF02373; JmjC; 1.
DR Pfam; PF02375; JmjN; 1.
DR Pfam; PF02928; zf-C5HC2; 1.
DR SMART; SM00542; FYRC; 1.
DR SMART; SM00541; FYRN; 1.
DR SMART; SM00558; JmjC; 1.
DR SMART; SM00545; JmjN; 1.
DR SUPFAM; SSF51197; Clavaminate synthase-like; 1.
DR PROSITE; PS51543; FYRC; 1.
DR PROSITE; PS51542; FYRN; 1.
DR PROSITE; PS51184; JMJC; 1.
DR PROSITE; PS51183; JMJN; 1.
PE 4: Predicted;
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000026915};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 147..188
FT /note="JmjN"
FT /evidence="ECO:0000259|PROSITE:PS51183"
FT DOMAIN 361..527
FT /note="JmjC"
FT /evidence="ECO:0000259|PROSITE:PS51184"
FT REGION 35..65
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 791..837
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 42..62
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1260 AA; 141852 MW; C23FF7BE515276E4 CRC64;
MGTELMRVCV KEENDDIPSV PPGFESYASF TLKRAQDTEK QESDNVMCCS APASTSETSP
VKKETELGNR GNAKITRSLR RRPWINYGRY DNSSEEEPDC GKLDQNLRLR LNLPKGVIRG
CPECNDCQKV TARWRPEEAC RPDLEDAPVF YPTEEEFEDT LKYIASIRPR AEQYGICRIV
PPSSWKPPCP LKEKNVWENS RFTTRVQRVD KLQNRDSMRK MSKVNNNMRR KRRRCMRMAV
DCGSDSGSIS GSADAGFCEV ERFGFEPGPE FTLEKFQKYA DDFKAQYLRR RENGVDMEGR
MTILQEHPEP SVENIEGEYW RVVEKATEEI EVLYGADLET GVFGSGFPKK PSQVEFVSNE
KYIKSGWNLN NFPRLPGSVL SYESSDISGV LVPWLYVGMC FSSFCWHVED HHLYSLNYMH
WGAPKIWYGV PGKDASKLEE AMRKHLPDLF DEQPDLLHKL VTQLSPSILK YEGVPVYRCV
QNAGEFVLTF PRAYHAGFNC GFNCAEAVNV APVDWLPHGQ IAIELYREQG RKTSISHDKL
LLGAAREAVK ALWELNLLKK YTSDNIRWKD MCGKDGVLAK TLKMRVEMEH RGREVLCSSS
LAVKMESNFD ATSERECSIC FFDLHLSAAG CHCSPDRYAC LNHAKQFCSC ARGAKIFLFR
YDINELNILV EALEGKLSAV YRWARLDLGL ALSSYVSRDN MLGAKLSHAL EVIPKGVQSQ
PSVNSVKDLP GEEMSKDKPL ILAQISAQML LLQRNKLPEA ALPSKVSNAK LKKEETILSA
SNLRMPVCHF SQEHRPSTGG ETAVESRVKK PSAPADDNII LLSDDEGDEP KKPVSERPKE
HFITKQSDVS LRLAPSGEAI TCNFNNEPIL TIPLTDAAVM NQRDASSPDV QRNSCSSHYS
QVKDEHAGND ITLFGYNHQN ISCHLDSAIA ESGRNVQDSC NSTEMYNINN NLVTVESNLQ
HLLPLESEKA NKDKFEKLGA IASSNLVDNA KANVGGPSCS QNNLDRNFRQ KGPRIAKVVR
RINCNVEPLE FGVVLSGNFW CNSQAIFPKG FKSRVRYINV LDPTNMAYYV SEILDAGRDG
PLFMVSVEHC PSEVFIHVSA ARCWEMVREK VNQEITKQHR LGRTNLPPLQ PPGSLDGFEM
FGFSSPAIVQ AVEAIDRNRV CTEYWDSRPY SRPRVQILQH SQLPDNGGNL FRTSGEQSNA
GDPRNNCLPG GVDTILRGLF KKANSEELHL LCSILSDKRP PVDVDRVARL LNEEIHRRPG
//
