ID A0A061F7J4_THECC Unreviewed; 181 AA.
AC A0A061F7J4;
DT 03-SEP-2014, integrated into UniProtKB/TrEMBL.
DT 03-SEP-2014, sequence version 1.
DT 27-MAR-2024, entry version 52.
DE SubName: Full=Plant-specific transcription factor YABBY family protein isoform 1 {ECO:0000313|EMBL:EOY13320.1};
GN ORFNames=TCM_031868 {ECO:0000313|EMBL:EOY13320.1};
OS Theobroma cacao (Cacao) (Cocoa).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Theobroma.
OX NCBI_TaxID=3641 {ECO:0000313|EMBL:EOY13320.1, ECO:0000313|Proteomes:UP000026915};
RN [1] {ECO:0000313|EMBL:EOY13320.1, ECO:0000313|Proteomes:UP000026915}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Matina 1-6 {ECO:0000313|Proteomes:UP000026915};
RX PubMed=23731509; DOI=10.1186/gb-2013-14-6-r53;
RA Motamayor J.C., Mockaitis K., Schmutz J., Haiminen N., Iii D.L.,
RA Cornejo O., Findley S.D., Zheng P., Utro F., Royaert S., Saski C.,
RA Jenkins J., Podicheti R., Zhao M., Scheffler B.E., Stack J.C., Feltus F.A.,
RA Mustiga G.M., Amores F., Phillips W., Marelli J.P., May G.D., Shapiro H.,
RA Ma J., Bustamante C.D., Schnell R.J., Main D., Gilbert D., Parida L.,
RA Kuhn D.N.;
RT "The genome sequence of the most widely cultivated cacao type and its use
RT to identify candidate genes regulating pod color.";
RL Genome Biol. 14:R53.1-R53.24(2013).
CC -!- SIMILARITY: Belongs to the YABBY family.
CC {ECO:0000256|ARBA:ARBA00010325}.
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DR EMBL; CM001885; EOY13320.1; -; Genomic_DNA.
DR RefSeq; XP_017979558.1; XM_018124069.1.
DR AlphaFoldDB; A0A061F7J4; -.
DR EnsemblPlants; EOY13320; EOY13320; TCM_031868.
DR EnsemblPlants; Tc07v2_t009380.1; Tc07v2_p009380.1; Tc07v2_g009380.
DR GeneID; 18594238; -.
DR Gramene; EOY13320; EOY13320; TCM_031868.
DR Gramene; Tc07v2_t009380.1; Tc07v2_p009380.1; Tc07v2_g009380.
DR eggNOG; ENOG502R9GD; Eukaryota.
DR HOGENOM; CLU_071156_0_1_1; -.
DR InParanoid; A0A061F7J4; -.
DR OMA; DSTEHFH; -.
DR OrthoDB; 588024at2759; -.
DR Proteomes; UP000026915; Chromosome 7.
DR GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR GO; GO:0045165; P:cell fate commitment; IBA:GO_Central.
DR CDD; cd00084; HMG-box_SF; 1.
DR InterPro; IPR036910; HMG_box_dom_sf.
DR InterPro; IPR006780; YABBY.
DR PANTHER; PTHR31675:SF28; AXIAL REGULATOR YABBY 5-LIKE; 1.
DR PANTHER; PTHR31675; PROTEIN YABBY 6-RELATED; 1.
DR Pfam; PF04690; YABBY; 1.
DR SUPFAM; SSF47095; HMG-box; 1.
PE 3: Inferred from homology;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Reference proteome {ECO:0000313|Proteomes:UP000026915}.
SQ SEQUENCE 181 AA; 20439 MW; C68F8CBFEC3D9B7C CRC64;
MSSSNNSAPE QLCYIPCNLC NIILAVNVPC SSLFETVTVR CGQCTNLCSV NLATSFPSRA
GKDIQVPSYT SSEYRIDLGS SSRCKNKLPK RATTVNTTPE RVVNRPPDKR HRAPSLYNQF
IKEEIQRIKL NNPDITHREA FSTAAKNWAR FPHIHFGLML ETDNQPKLND DSTEHFQQLL
K
//
