ID A0A061FK86_THECC Unreviewed; 669 AA.
AC A0A061FK86;
DT 03-SEP-2014, integrated into UniProtKB/TrEMBL.
DT 03-SEP-2014, sequence version 1.
DT 27-MAR-2024, entry version 40.
DE SubName: Full=Pentatricopeptide repeat-containing protein, putative isoform 1 {ECO:0000313|EMBL:EOY17313.1};
GN ORFNames=TCM_036474 {ECO:0000313|EMBL:EOY17313.1};
OS Theobroma cacao (Cacao) (Cocoa).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Theobroma.
OX NCBI_TaxID=3641 {ECO:0000313|EMBL:EOY17313.1, ECO:0000313|Proteomes:UP000026915};
RN [1] {ECO:0000313|EMBL:EOY17313.1, ECO:0000313|Proteomes:UP000026915}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Matina 1-6 {ECO:0000313|Proteomes:UP000026915};
RX PubMed=23731509; DOI=10.1186/gb-2013-14-6-r53;
RA Motamayor J.C., Mockaitis K., Schmutz J., Haiminen N., Iii D.L.,
RA Cornejo O., Findley S.D., Zheng P., Utro F., Royaert S., Saski C.,
RA Jenkins J., Podicheti R., Zhao M., Scheffler B.E., Stack J.C., Feltus F.A.,
RA Mustiga G.M., Amores F., Phillips W., Marelli J.P., May G.D., Shapiro H.,
RA Ma J., Bustamante C.D., Schnell R.J., Main D., Gilbert D., Parida L.,
RA Kuhn D.N.;
RT "The genome sequence of the most widely cultivated cacao type and its use
RT to identify candidate genes regulating pod color.";
RL Genome Biol. 14:R53.1-R53.24(2013).
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DR EMBL; CM001886; EOY17313.1; -; Genomic_DNA.
DR EMBL; CM001886; EOY17314.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A061FK86; -.
DR STRING; 3641.A0A061FK86; -.
DR EnsemblPlants; EOY17313; EOY17313; TCM_036474.
DR EnsemblPlants; EOY17314; EOY17314; TCM_036474.
DR Gramene; EOY17313; EOY17313; TCM_036474.
DR Gramene; EOY17314; EOY17314; TCM_036474.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_002706_15_1_1; -.
DR InParanoid; A0A061FK86; -.
DR OMA; CHSTMKL; -.
DR Proteomes; UP000026915; Chromosome 8.
DR GO; GO:0043231; C:intracellular membrane-bounded organelle; IBA:GO_Central.
DR GO; GO:0003723; F:RNA binding; IBA:GO_Central.
DR GO; GO:0009451; P:RNA modification; IBA:GO_Central.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 5.
DR InterPro; IPR046848; E_motif.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 4.
DR PANTHER; PTHR47928:SF190; OS04G0110500 PROTEIN; 1.
DR PANTHER; PTHR47928; REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED; 1.
DR Pfam; PF20431; E_motif; 1.
DR Pfam; PF01535; PPR; 2.
DR Pfam; PF13041; PPR_2; 5.
DR PROSITE; PS51375; PPR; 6.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000026915};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT REPEAT 50..80
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 81..115
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 182..216
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 254..288
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 391..425
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 492..526
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
SQ SEQUENCE 669 AA; 74182 MW; 95E9FB41F12E3569 CRC64;
MLLEPLDSVI YTPLDSVIYT KLVQHSTKSG CFLHGKLAHT HIIKSAFKPC LFLLNNLLNM
YCKAGEMDVA HRLFDRMSKP NLVSYNSLIS GYTQMGAFDK AMQVFLEARK SCLKLDKFTY
AGALNACAQT GGLELGKLIH GLIVVSGLVE KTFLTNSLID MYCKCECLDH ARFLFENSKE
LDEVSWNTLI AGYVAMNGKE EMLKLLINMH RNGLNLNSYT MGSVLKACCT IIDIGRTYGE
MLHGCIIKLG LDVDIVVGTA LLDMYAKKGE VNSAVKIFET MPDRNIVMYN AMISGFIEAE
SISKECANEA FSLFSELKRQ GLKPSKFTFS SMLKACYAVE DFDHGKQIHA QICKYNLQCD
EFIGSALIEL YSLMGSSEDS LKCFRSTPKR DIVLWTSMIA GHVQNGQFES ALNLFHELLA
SGGRPDEFII SSMFSACADS ATASLGEQVH GHAIRSSLGN FRIVQNSQLC MYAKCGDIGS
ADLTFREMQN PDVVSWSVMI CSYAQHGCAR DALNLFELMK EHGIAPNHIT FIGVLCACSY
GGLVEEGLQF FESMKHYDVE TSAEHYCCVV DLFGRAGRLA EAENFILTSC FKDNAVIWRA
LLSACRVYKD TVTAKHAARK VIELQPQEAA SYVLVYNIYA DAAVEPLAAS VREMMGRQGV
KKEPGLSWI
//
