ID   A0A061FUI6_THECC        Unreviewed;       811 AA.
AC   A0A061FUI6;
DT   03-SEP-2014, integrated into UniProtKB/TrEMBL.
DT   03-SEP-2014, sequence version 1.
DT   27-MAR-2024, entry version 37.
DE   SubName: Full=Plastid transcriptionally active 2 isoform 3 {ECO:0000313|EMBL:EOY20557.1};
GN   ORFNames=TCM_011951 {ECO:0000313|EMBL:EOY20557.1};
OS   Theobroma cacao (Cacao) (Cocoa).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Theobroma.
OX   NCBI_TaxID=3641 {ECO:0000313|EMBL:EOY20557.1, ECO:0000313|Proteomes:UP000026915};
RN   [1] {ECO:0000313|EMBL:EOY20557.1, ECO:0000313|Proteomes:UP000026915}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Matina 1-6 {ECO:0000313|Proteomes:UP000026915};
RX   PubMed=23731509; DOI=10.1186/gb-2013-14-6-r53;
RA   Motamayor J.C., Mockaitis K., Schmutz J., Haiminen N., Iii D.L.,
RA   Cornejo O., Findley S.D., Zheng P., Utro F., Royaert S., Saski C.,
RA   Jenkins J., Podicheti R., Zhao M., Scheffler B.E., Stack J.C., Feltus F.A.,
RA   Mustiga G.M., Amores F., Phillips W., Marelli J.P., May G.D., Shapiro H.,
RA   Ma J., Bustamante C.D., Schnell R.J., Main D., Gilbert D., Parida L.,
RA   Kuhn D.N.;
RT   "The genome sequence of the most widely cultivated cacao type and its use
RT   to identify candidate genes regulating pod color.";
RL   Genome Biol. 14:R53.1-R53.24(2013).
CC   -!- SIMILARITY: Belongs to the PPR family. P subfamily.
CC       {ECO:0000256|ARBA:ARBA00007626}.
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DR   EMBL; CM001881; EOY20557.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A061FUI6; -.
DR   EnsemblPlants; EOY20557; EOY20557; TCM_011951.
DR   Gramene; EOY20557; EOY20557; TCM_011951.
DR   Proteomes; UP000026915; Chromosome 3.
DR   Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 4.
DR   InterPro; IPR002885; Pentatricopeptide_rpt.
DR   InterPro; IPR011990; TPR-like_helical_dom_sf.
DR   NCBIfam; TIGR00756; PPR; 10.
DR   PANTHER; PTHR47936:SF1; PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN GUN1, CHLOROPLASTIC; 1.
DR   PANTHER; PTHR47936; PPR_LONG DOMAIN-CONTAINING PROTEIN; 1.
DR   Pfam; PF01535; PPR; 2.
DR   Pfam; PF13041; PPR_2; 2.
DR   Pfam; PF13812; PPR_3; 3.
DR   SUPFAM; SSF48452; TPR-like; 1.
DR   PROSITE; PS51375; PPR; 13.
PE   3: Inferred from homology;
KW   Reference proteome {ECO:0000313|Proteomes:UP000026915};
KW   Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT   REPEAT          135..169
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          170..204
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          205..240
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          241..275
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          276..310
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          311..345
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          346..380
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          381..415
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          416..450
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          486..520
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          521..555
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          556..590
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          591..625
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
SQ   SEQUENCE   811 AA;  91526 MW;  D9080DD7CD244812 CRC64;
     MAISIPNHFL ALTQPSNFAL NRRQLSSNRI FTGGNHSFLS GGAGICRAKP RELVLGNPSV
     TVEKGKYSYD VETLINKLSS LPPRGSIARC LDVFRNKLSL NDFALVFKEF AHRGDWQRSL
     RLFKYMQRQI WCKPNEHIYT IMISLLGREG LLEKCREVFD EMPSQGVTRS VFAYTALINA
     YGRNGAYNIS LELLDKMKKD KVLPSILTYN TVINACARGG LDWEGLLGLF AEMRHEGIQP
     DIVTYNTLLS ACANRGLGNE AEMVFRTMNE GGILPDLTTY SYLVESFGKL GKLEKVSELL
     KEMESGGNLP DIMSYNVLLE AYAKSGSIKE AMGVFKQMQV AGCAPNATTY SILLNLYGRN
     GRYDDVRELF LEMKESNTEP DAATYNILIQ VFGEGGYFKE VVTLFHDMVE ENIEPNVKTY
     DGLIFACGKG GLHEDAKKIL LHMNEKCIVP SSRAYTGVIE AYGQAALYEE VLVAFNTMNE
     VESNPTIETY NSLLQTFARG GLYKEANAIL SRMNETGVAK NRDSFNALIE AFRQGGQFED
     AIKAYVEMEK ARCDPDERTL EAVLSVYCFA GLVDESNEQF QEIKALGVLP SVMCYCMMLA
     VYAKCDRWDD AYQLFDEMLT NKVSNIHQVI GKMIRGDYDD DANWQMVEYV FDKLNSEGCG
     FGIRFYNALL EALWWLRQKE RAARVLNEAT KRGLFPELFR KNKLVWSVDV HRMWEGGTYT
     AVSIWLNSMQ KMFLSGDDLP QLATVVVAWR KAQLPVIFQL QKLPIHSCRI LCRHHFLSLG
     GTKGELSVSG LSLSEFCQPQ AHLQMSRKRI I
//