ID A0A061G748_THECC Unreviewed; 845 AA.
AC A0A061G748;
DT 03-SEP-2014, integrated into UniProtKB/TrEMBL.
DT 03-SEP-2014, sequence version 1.
DT 27-MAR-2024, entry version 43.
DE SubName: Full=Tetratricopeptide repeat-like superfamily protein, putative isoform 1 {ECO:0000313|EMBL:EOY25411.1};
GN ORFNames=TCM_016726 {ECO:0000313|EMBL:EOY25411.1};
OS Theobroma cacao (Cacao) (Cocoa).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Theobroma.
OX NCBI_TaxID=3641 {ECO:0000313|EMBL:EOY25411.1, ECO:0000313|Proteomes:UP000026915};
RN [1] {ECO:0000313|EMBL:EOY25411.1, ECO:0000313|Proteomes:UP000026915}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Matina 1-6 {ECO:0000313|Proteomes:UP000026915};
RX PubMed=23731509; DOI=10.1186/gb-2013-14-6-r53;
RA Motamayor J.C., Mockaitis K., Schmutz J., Haiminen N., Iii D.L.,
RA Cornejo O., Findley S.D., Zheng P., Utro F., Royaert S., Saski C.,
RA Jenkins J., Podicheti R., Zhao M., Scheffler B.E., Stack J.C., Feltus F.A.,
RA Mustiga G.M., Amores F., Phillips W., Marelli J.P., May G.D., Shapiro H.,
RA Ma J., Bustamante C.D., Schnell R.J., Main D., Gilbert D., Parida L.,
RA Kuhn D.N.;
RT "The genome sequence of the most widely cultivated cacao type and its use
RT to identify candidate genes regulating pod color.";
RL Genome Biol. 14:R53.1-R53.24(2013).
CC -!- SIMILARITY: Belongs to the PPR family. P subfamily.
CC {ECO:0000256|ARBA:ARBA00007626}.
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DR EMBL; CM001881; EOY25407.1; -; Genomic_DNA.
DR EMBL; CM001881; EOY25408.1; -; Genomic_DNA.
DR EMBL; CM001881; EOY25409.1; -; Genomic_DNA.
DR EMBL; CM001881; EOY25410.1; -; Genomic_DNA.
DR EMBL; CM001881; EOY25411.1; -; Genomic_DNA.
DR EMBL; CM001881; EOY25412.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A061G748; -.
DR STRING; 3641.A0A061G748; -.
DR EnsemblPlants; EOY25407; EOY25407; TCM_016726.
DR EnsemblPlants; EOY25408; EOY25408; TCM_016726.
DR EnsemblPlants; EOY25409; EOY25409; TCM_016726.
DR EnsemblPlants; EOY25410; EOY25410; TCM_016726.
DR EnsemblPlants; EOY25411; EOY25411; TCM_016726.
DR EnsemblPlants; EOY25412; EOY25412; TCM_016726.
DR Gramene; EOY25407; EOY25407; TCM_016726.
DR Gramene; EOY25408; EOY25408; TCM_016726.
DR Gramene; EOY25409; EOY25409; TCM_016726.
DR Gramene; EOY25410; EOY25410; TCM_016726.
DR Gramene; EOY25411; EOY25411; TCM_016726.
DR Gramene; EOY25412; EOY25412; TCM_016726.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_002706_49_12_1; -.
DR InParanoid; A0A061G748; -.
DR OMA; VYTYGVM; -.
DR Proteomes; UP000026915; Chromosome 3.
DR GO; GO:0003729; F:mRNA binding; IBA:GO_Central.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 9.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 14.
DR PANTHER; PTHR45613:SF476; MITOCHONDRIAL GROUP I INTRON SPLICING FACTOR CCM1; 1.
DR PANTHER; PTHR45613; PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN; 1.
DR Pfam; PF01535; PPR; 2.
DR Pfam; PF12854; PPR_1; 2.
DR Pfam; PF13041; PPR_2; 6.
DR SUPFAM; SSF48452; TPR-like; 1.
DR PROSITE; PS51375; PPR; 16.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000026915};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT REPEAT 264..298
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 299..333
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 334..368
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 369..403
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 404..438
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 439..473
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 474..508
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 509..543
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 544..578
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 579..613
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 614..648
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 649..683
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 684..718
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 719..753
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 754..788
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 789..823
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REGION 35..62
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 845 AA; 94428 MW; AAB28210939FC0CD CRC64;
MDLRRLAVNK PIYIYTPITR PLTCVTSTTS AAAAAQQFNP QQQPQPPLNL TDSDSSNDSN
NNNNQGLLGR LSCILSKSSL DSSKCKQLLP LLSPLDFDRF FSAISSHLNP KTTLHFFYLA
SQSFNFRFTL RSYCILILLL LLANHSSPAR LLFIRLIDGK LPLSSPNNTT IDHIQITTAL
ADLNTLSKGV PRVMGVDMLL HLYCTQFKNA GFTSAIDVFF TLADKGMFPS SKTCNFFLSS
LVKANELQKT YQVFETLSRF VSLDVYLCTT MINAFCKGGR IQDAFALFSR MENLGIAPNV
VTYNNIIHGL CKSGRLDEAF QLKQNMTRHG VQPNLITFSV LINGLIKLNK FEEANFVLKE
MSGKGFVPNE VVYNTLIDGY CKMGNIDEAL GVRDEMLSKG MIPNSVTLNS LVQGLCRTGQ
MEHAEHLLEE MLSIGLSINL GAFSSVIHWL CMKSRFDSAL HFTRKMLLKN LRPNDRLITT
LVGGLCKDGK HSEAIELWFK LFEKGFAANT VTSNALLHGL YEAGKMQEAI RLLKEMIQSG
LVLDRVSYNT LILGWCKAGK VEEAFRLKEE MFKRGIQPDI YTYNLLLHGI SNMGKMKDAT
NIWDECKRHG IVSNVYTYAI MMDGYCKVDK IEECQNLFDE LVTNKVDLNA VVYNTLIRAY
CKNGNIMAAF KLHDDMKSKG IPPTICTYSS LIHGLCNMGL PEDARQLLLE MRGLGLVPNV
VCYTALLGGY CRLGQMDKVG SLLQEMSSSN VQPNKITYTV MIDGYCKLGN MKEAGKLLCL
MVKNGIVPDV VTYNAFTNGL CKEGRVEDAF KVCDHMASEG LPLDEITYTT LIHEWHLPSA
WSNQE
//
