ID A0A061GCH5_THECC Unreviewed; 659 AA.
AC A0A061GCH5;
DT 03-SEP-2014, integrated into UniProtKB/TrEMBL.
DT 03-SEP-2014, sequence version 1.
DT 24-JAN-2024, entry version 39.
DE SubName: Full=RING/FYVE/PHD zinc finger superfamily protein {ECO:0000313|EMBL:EOY24729.1};
GN ORFNames=TCM_016252 {ECO:0000313|EMBL:EOY24729.1};
OS Theobroma cacao (Cacao) (Cocoa).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Theobroma.
OX NCBI_TaxID=3641 {ECO:0000313|EMBL:EOY24729.1, ECO:0000313|Proteomes:UP000026915};
RN [1] {ECO:0000313|EMBL:EOY24729.1, ECO:0000313|Proteomes:UP000026915}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Matina 1-6 {ECO:0000313|Proteomes:UP000026915};
RX PubMed=23731509; DOI=10.1186/gb-2013-14-6-r53;
RA Motamayor J.C., Mockaitis K., Schmutz J., Haiminen N., Iii D.L.,
RA Cornejo O., Findley S.D., Zheng P., Utro F., Royaert S., Saski C.,
RA Jenkins J., Podicheti R., Zhao M., Scheffler B.E., Stack J.C., Feltus F.A.,
RA Mustiga G.M., Amores F., Phillips W., Marelli J.P., May G.D., Shapiro H.,
RA Ma J., Bustamante C.D., Schnell R.J., Main D., Gilbert D., Parida L.,
RA Kuhn D.N.;
RT "The genome sequence of the most widely cultivated cacao type and its use
RT to identify candidate genes regulating pod color.";
RL Genome Biol. 14:R53.1-R53.24(2013).
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DR EMBL; CM001881; EOY24729.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A061GCH5; -.
DR STRING; 3641.A0A061GCH5; -.
DR EnsemblPlants; EOY24729; EOY24729; TCM_016252.
DR Gramene; EOY24729; EOY24729; TCM_016252.
DR eggNOG; KOG1844; Eukaryota.
DR HOGENOM; CLU_012141_0_0_1; -.
DR InParanoid; A0A061GCH5; -.
DR OMA; EIYWGLR; -.
DR Proteomes; UP000026915; Chromosome 3.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0009555; P:pollen development; IEA:EnsemblPlants.
DR GO; GO:0043068; P:positive regulation of programmed cell death; IEA:EnsemblPlants.
DR CDD; cd15556; PHD_MMD1_like; 1.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 1.
DR InterPro; IPR019786; Zinc_finger_PHD-type_CS.
DR InterPro; IPR011011; Znf_FYVE_PHD.
DR InterPro; IPR001965; Znf_PHD.
DR InterPro; IPR019787; Znf_PHD-finger.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR PANTHER; PTHR46201; PHD FINGER PROTEIN MALE MEIOCYTE DEATH 1-RELATED; 1.
DR PANTHER; PTHR46201:SF1; PHD FINGER PROTEIN MALE STERILITY 1; 1.
DR Pfam; PF00628; PHD; 1.
DR SMART; SM00249; PHD; 1.
DR SUPFAM; SSF57903; FYVE/PHD zinc finger; 1.
DR PROSITE; PS01359; ZF_PHD_1; 1.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Reference proteome {ECO:0000313|Proteomes:UP000026915};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771}.
FT DOMAIN 603..649
FT /note="Zinc finger PHD-type"
FT /evidence="ECO:0000259|SMART:SM00249"
SQ SEQUENCE 659 AA; 74880 MW; 9B886D6C039A9143 CRC64;
MSSHLDVGAA YCRKRRRGGE RVFKFRSFGE NGCPVEFDGS FRDNVNALLE YGHLESNLCN
GMLSWSFQLE VHRHPPLHTL LFVVEEPIEA SISLYCKHCQ YVGWGHHMIC NKKYHFLLPS
KDAVAACFSC GESNLDDPNP EKGKFNLVEL QGHIMHGVFH SNGFGHLLCV NGVEMGSDLA
GYQIMDFWDR LCTGLQARKV SLNDTSRKRG MELRLLHGVA YGEPWFGRWG YKFGRGCYGV
NEPIYQKAIE AIQGMPLCLL NHHLSISYND ISVIFSRYQA LADHSMVTLG DLFDFMLGLR
SRLPKENSID SCNPAILVET SCRWSHKRVE AATRVIVEAL KRAEFRWVSR QEVRDAARAY
IGDTGLLDFV LKSLGNHIVG NYLVRRCLNP VTKVLEYCLE DISTVFPNPE TLLLNNSKVK
PRCKITKAQL MKDISFLFKH ILKEQKPTLS TGIFSSIPMA ARIILDTKFL AKEYSEELSM
KVKSSLNGKF KLFCTVILRN DEEIDEGLKK PMLPCECVTL QETATINDLK LEVEKNFRQV
YWRLRSFVVE TIVNLNAKGS DLVLGSVEMG QTIVVVGSND DQTGMIMNEV MMCEWGLNSR
IVECPCGARE DDGERLISCD ICEVWQHTRC VRIPNNEEIP HVFLCKQCEE KIMFLPSLP
//
