ID A0A063BI21_9BURK Unreviewed; 867 AA.
AC A0A063BI21;
DT 03-SEP-2014, integrated into UniProtKB/TrEMBL.
DT 03-SEP-2014, sequence version 1.
DT 27-MAR-2024, entry version 28.
DE SubName: Full=Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) {ECO:0000313|EMBL:KDB10665.1};
GN ORFNames=LIG30_4784 {ECO:0000313|EMBL:KDB10665.1};
OS Burkholderia sp. lig30.
OC Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
OC Burkholderiaceae; Burkholderia.
OX NCBI_TaxID=1192124 {ECO:0000313|EMBL:KDB10665.1, ECO:0000313|Proteomes:UP000027020};
RN [1] {ECO:0000313|EMBL:KDB10665.1, ECO:0000313|Proteomes:UP000027020}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=LIG30 {ECO:0000313|Proteomes:UP000027020};
RA Woo H.L., Utturkar S.M., Klingeman D.M., Simmons B.A., DeAngelis K.M.,
RA Brown S.D., Hazen T.C.;
RT "Draft Genome of the Lignin-degrading Burkholderia sp. Strain LIG30,
RT Isolated from Wet Tropical Forest Soil.";
RL Submitted (MAR-2014) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KDB10665.1}.
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DR EMBL; JGVW01000003; KDB10665.1; -; Genomic_DNA.
DR RefSeq; WP_051994802.1; NZ_JGVW01000003.1.
DR AlphaFoldDB; A0A063BI21; -.
DR STRING; 1192124.LIG30_4784; -.
DR PATRIC; fig|1192124.4.peg.32; -.
DR eggNOG; COG5001; Bacteria.
DR OrthoDB; 9813903at2; -.
DR Proteomes; UP000027020; Unassembled WGS sequence.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd01948; EAL; 1.
DR CDD; cd01949; GGDEF; 1.
DR CDD; cd00130; PAS; 2.
DR Gene3D; 3.30.70.270; -; 1.
DR Gene3D; 3.20.20.450; EAL domain; 1.
DR Gene3D; 3.30.450.20; PAS domain; 3.
DR InterPro; IPR001633; EAL_dom.
DR InterPro; IPR035919; EAL_sf.
DR InterPro; IPR000160; GGDEF_dom.
DR InterPro; IPR029787; Nucleotide_cyclase.
DR InterPro; IPR001610; PAC.
DR InterPro; IPR000014; PAS.
DR InterPro; IPR000700; PAS-assoc_C.
DR InterPro; IPR035965; PAS-like_dom_sf.
DR InterPro; IPR013767; PAS_fold.
DR InterPro; IPR043128; Rev_trsase/Diguanyl_cyclase.
DR NCBIfam; TIGR00254; GGDEF; 1.
DR NCBIfam; TIGR00229; sensory_box; 2.
DR PANTHER; PTHR44757:SF11; DIGUANYLATE CYCLASE DGCE-RELATED; 1.
DR PANTHER; PTHR44757; DIGUANYLATE CYCLASE DGCP; 1.
DR Pfam; PF00563; EAL; 1.
DR Pfam; PF00990; GGDEF; 1.
DR Pfam; PF00989; PAS; 1.
DR Pfam; PF13188; PAS_8; 1.
DR Pfam; PF13426; PAS_9; 1.
DR SMART; SM00052; EAL; 1.
DR SMART; SM00267; GGDEF; 1.
DR SMART; SM00086; PAC; 2.
DR SMART; SM00091; PAS; 3.
DR SUPFAM; SSF141868; EAL domain-like; 1.
DR SUPFAM; SSF55073; Nucleotide cyclase; 1.
DR SUPFAM; SSF55785; PYP-like sensor domain (PAS domain); 3.
DR PROSITE; PS50883; EAL; 1.
DR PROSITE; PS50887; GGDEF; 1.
DR PROSITE; PS50113; PAC; 2.
DR PROSITE; PS50112; PAS; 2.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000027020}.
FT DOMAIN 21..92
FT /note="PAS"
FT /evidence="ECO:0000259|PROSITE:PS50112"
FT DOMAIN 95..147
FT /note="PAC"
FT /evidence="ECO:0000259|PROSITE:PS50113"
FT DOMAIN 276..316
FT /note="PAS"
FT /evidence="ECO:0000259|PROSITE:PS50112"
FT DOMAIN 354..406
FT /note="PAC"
FT /evidence="ECO:0000259|PROSITE:PS50113"
FT DOMAIN 438..571
FT /note="GGDEF"
FT /evidence="ECO:0000259|PROSITE:PS50887"
FT DOMAIN 582..837
FT /note="EAL"
FT /evidence="ECO:0000259|PROSITE:PS50883"
SQ SEQUENCE 867 AA; 95560 MW; 8706FB451A0E75A9 CRC64;
MTTQGANDRS SRRTSDITHV KPGALDELYT SVPAMMHSID ANGRLIHVSD MWLATLGFAR
GEVIGRLSSD FLTESSRKHA REVVLPDFFR TGRCDDVEYQ MICRDGNVID VLLSGKLLRD
ESGNPFRSIA VIRDITDKKR LDRALAQSEL RYRALFQHVQ AGFALLQLDA ARSNAPALIF
VAVNPEFCGL CGLPEFRLVD KPVGGVLSVL LHEASACETV LCEVARTGAR KEMRDLRGPR
ARWFDIVSYS PGAGQCAILV QETTHRKWMQ ETLSRQHEQI RVTLHSIGDA VIATDTTGRV
QYLNPMAEHL TGWQSDAAGN QEIESVFHIF DERTGIQAPN PIARCLAEDR ATQLDDGMVL
VAKDGRHFSI EDSAAPIKDA DGVTSGVVLV FRDVTEQRRI SKEIAYRATH DALTGLLNRA
EFEARLQQAL EGVRGSPNRG AVFYLDLDQF KLVNDTCGHA AGDALLKRVA SHLGESLDMP
HTLARLGGDE FGIILPDCPV SRVEEVATGL CRRLDAMRFE YKGCHFCVGV SIGAALLDGK
LASVDAIMQC VDSACYAAKD AGRNRVHVWS ETDQAMLARK DEMEWVRRLR QAIDENRFVL
YAQEIFSLQA PAAAKRFEVL LRLPGEQGSL IPPGAFLPAA ERFNIASRID RWVVNQVFRW
MANYSGQLDH IEYISVNLSG QSIGDMEFLE FLKNLLGRFP VNGSKLCIEV TETAAITNLD
AAAVFVNALK KYGVRFALDD FGSGASSFGY LKALPVNYLK IDGQFVRHLD QDALDRTVVK
CIQEVANVLG KETIAEFVET AEVSAILTEM GVGSAQGFFL HRPQPIAIVL TSRSPSAIAL
PARKPDILLG REKSGPVTPI VGTGRRR
//
