ID A0A067F4J7_CITSI Unreviewed; 570 AA.
AC A0A067F4J7;
DT 03-SEP-2014, integrated into UniProtKB/TrEMBL.
DT 03-SEP-2014, sequence version 1.
DT 27-MAR-2024, entry version 35.
DE RecName: Full=C3H1-type domain-containing protein {ECO:0008006|Google:ProtNLM};
GN ORFNames=CISIN_1g007997mg {ECO:0000313|EMBL:KDO58412.1};
OS Citrus sinensis (Sweet orange) (Citrus aurantium var. sinensis).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus.
OX NCBI_TaxID=2711 {ECO:0000313|EMBL:KDO58412.1, ECO:0000313|Proteomes:UP000027120};
RN [1] {ECO:0000313|EMBL:KDO58412.1, ECO:0000313|Proteomes:UP000027120}
RP NUCLEOTIDE SEQUENCE.
RG International Citrus Genome Consortium;
RA Gmitter F., Chen C., Farmerie W., Harkins T., Desany B., Mohiuddin M.,
RA Kodira C., Borodovsky M., Lomsadze A., Burns P., Jenkins J., Prochnik S.,
RA Shu S., Chapman J., Pitluck S., Schmutz J., Rokhsar D.;
RL Submitted (APR-2014) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; KK784949; KDO58412.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A067F4J7; -.
DR Proteomes; UP000027120; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-UniRule.
DR CDD; cd12458; RRM_AtC3H46_like; 1.
DR Gene3D; 3.30.70.330; -; 1.
DR Gene3D; 4.10.1000.10; Zinc finger, CCCH-type; 1.
DR InterPro; IPR034365; AtC3H46-like_RRM.
DR InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR InterPro; IPR025605; OST-HTH/LOTUS_dom.
DR InterPro; IPR035979; RBD_domain_sf.
DR InterPro; IPR000504; RRM_dom.
DR InterPro; IPR000571; Znf_CCCH.
DR InterPro; IPR036855; Znf_CCCH_sf.
DR PANTHER; PTHR24009; RNA-BINDING (RRM/RBD/RNP MOTIFS); 1.
DR PANTHER; PTHR24009:SF0; ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 18; 1.
DR Pfam; PF00076; RRM_1; 1.
DR SMART; SM00360; RRM; 1.
DR SUPFAM; SSF90229; CCCH zinc finger; 1.
DR SUPFAM; SSF54928; RNA-binding domain, RBD; 1.
DR PROSITE; PS51644; HTH_OST; 1.
DR PROSITE; PS50102; RRM; 1.
DR PROSITE; PS50103; ZF_C3H1; 1.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723, ECO:0000256|PROSITE-
KW ProRule:PRU00723}; Reference proteome {ECO:0000313|Proteomes:UP000027120};
KW RNA-binding {ECO:0000256|PROSITE-ProRule:PRU00176};
KW Zinc {ECO:0000256|ARBA:ARBA00022833, ECO:0000256|PROSITE-ProRule:PRU00723};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00723}.
FT DOMAIN 189..216
FT /note="C3H1-type"
FT /evidence="ECO:0000259|PROSITE:PS50103"
FT DOMAIN 243..326
FT /note="HTH OST-type"
FT /evidence="ECO:0000259|PROSITE:PS51644"
FT DOMAIN 349..424
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT ZN_FING 189..216
FT /note="C3H1-type"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00723"
FT COILED 464..492
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 570 AA; 64917 MW; ED65703C5FC4C4E0 CRC64;
MDFTESTKAV YNRIQKLEPE NVSKIIGYLL LQDHGERDMI RLAFSPDHLI YSLINEAKMK
LGLGKPTVSP PISPASVADL PLQFAPFSPA STRPVSSPAS MRAAASPFWD PQMAADQQQQ
VNSIEFVQPG YSDTAAEDFC LQNQMQFLTL EDQFDSVNSV NSDFSSSYFY PEPALGHVRT
SRRSPSLPEF PVKVCHYFNK GFCKHGNNCR YFHGHPMPES FSQIFSPNAN DIRNEDHVFS
PGSLERLEAE ITELLKQRRG FPISIASLPM MYYEKYGKTL QAEGYLTESQ RHGKAGYSLT
KLLARLKNSI RLIDRPHGQH SVILAEDVPK YLEYSGEKSD PGGIVAGSRQ IYLTFPAEST
FTEQDVSNYF SKFGPVQDVR IPCQQKRMFG FVTFVFAETV KQILAKGNPH FVCGARVLVK
PYREKSRLVD RKYVEKMQHP MFCSLHFTDG DTELHTMPRA CNNSRLLRKQ LMEEHEQAIE
LERRRLSEMQ LACKPMNHHS YFGYSMDELQ VSEAPAEQGD FPSAERFNYL LDVLNNGSTS
EDQVSHISTH YNDQDRSKDL TFLRARLHLP
//
