ID A0A067LDJ7_JATCU Unreviewed; 1338 AA.
AC A0A067LDJ7;
DT 03-SEP-2014, integrated into UniProtKB/TrEMBL.
DT 03-SEP-2014, sequence version 1.
DT 27-MAR-2024, entry version 43.
DE RecName: Full=DExH-box ATP-dependent RNA helicase DExH11 {ECO:0008006|Google:ProtNLM};
GN ORFNames=JCGZ_08533 {ECO:0000313|EMBL:KDP46561.1};
OS Jatropha curcas (Barbados nut).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Jatropheae;
OC Jatropha.
OX NCBI_TaxID=180498 {ECO:0000313|EMBL:KDP46561.1, ECO:0000313|Proteomes:UP000027138};
RN [1] {ECO:0000313|EMBL:KDP46561.1, ECO:0000313|Proteomes:UP000027138}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. GZQX0401 {ECO:0000313|Proteomes:UP000027138};
RC TISSUE=Young leaves {ECO:0000313|EMBL:KDP46561.1};
RX PubMed=24837971; DOI=10.1371/journal.pone.0097878;
RA Zhang L., Zhang C., Wu P., Chen Y., Li M., Jiang H., Wu G.;
RT "Global Analysis of Gene Expression Profiles in Physic Nut (Jatropha curcas
RT L.) Seedlings Exposed to Salt Stress.";
RL PLoS ONE 9:E97878-E97878(2014).
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DR EMBL; KK914217; KDP46561.1; -; Genomic_DNA.
DR RefSeq; XP_012068365.1; XM_012212975.1.
DR STRING; 180498.A0A067LDJ7; -.
DR GeneID; 105630976; -.
DR KEGG; jcu:105630976; -.
DR OrthoDB; 1352at2759; -.
DR Proteomes; UP000027138; Unassembled WGS sequence.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016787; F:hydrolase activity; IEA:UniProtKB-KW.
DR GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR GO; GO:0003724; F:RNA helicase activity; IEA:InterPro.
DR GO; GO:0006401; P:RNA catabolic process; IEA:InterPro.
DR CDD; cd18795; SF2_C_Ski2; 1.
DR Gene3D; 1.10.3380.30; -; 2.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 2.
DR InterPro; IPR011545; DEAD/DEAH_box_helicase_dom.
DR InterPro; IPR014001; Helicase_ATP-bd.
DR InterPro; IPR001650; Helicase_C.
DR InterPro; IPR048392; MTR4-like_stalk.
DR InterPro; IPR025696; MTR4_beta-barrel.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR016438; SKI2-like.
DR InterPro; IPR012961; Ski2/MTR4_C.
DR InterPro; IPR040801; Ski2_N.
DR PANTHER; PTHR12131; ATP-DEPENDENT RNA AND DNA HELICASE; 1.
DR PANTHER; PTHR12131:SF24; DEXH-BOX ATP-DEPENDENT RNA HELICASE DEXH11; 1.
DR Pfam; PF00270; DEAD; 1.
DR Pfam; PF08148; DSHCT; 1.
DR Pfam; PF00271; Helicase_C; 1.
DR Pfam; PF21408; MTR4-like_stalk; 1.
DR Pfam; PF13234; MTR4_beta-barrel; 1.
DR Pfam; PF17911; Ski2_N; 1.
DR PIRSF; PIRSF005198; Antiviral_helicase_SKI2; 1.
DR SMART; SM00487; DEXDc; 1.
DR SMART; SM01142; DSHCT; 1.
DR SMART; SM00490; HELICc; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR PROSITE; PS51194; HELICASE_CTER; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW Helicase {ECO:0000256|ARBA:ARBA00022806};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Reference proteome {ECO:0000313|Proteomes:UP000027138};
KW RNA-binding {ECO:0000256|ARBA:ARBA00022884}.
FT DOMAIN 365..520
FT /note="Helicase ATP-binding"
FT /evidence="ECO:0000259|PROSITE:PS51192"
FT DOMAIN 628..830
FT /note="Helicase C-terminal"
FT /evidence="ECO:0000259|PROSITE:PS51194"
FT REGION 568..620
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 595..620
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1338 AA; 149662 MW; F378D16388548034 CRC64;
MDRIQATNEL AFRVGFSGYS GHLRVEPLST VERPNPVKSL PDFILPPAFP RETYESIKEH
IEEEYLFPRL DTDEFSAEKA GRQWDFDWFE RAKVLQEPSL PRSIVVPTWE LPFRRKKSGS
EQGIWEPNSV QVDVSELTVG AQDSSPLPRI VGPAKDFVRG SINNRPFHPG GLDNSQSLER
VLPAGATNGE WVHELLNGGP AQSIPPSLKR GLDLGDLKVY PSAWNVYKDQ SPISTTPEEK
LNELSIQFDD LFKKAWEEDI VPEYVGDGHL SEEESPEFDA DVSKVNVPGN VSETESSVLD
EILSAESGAL TSKSNGTSEG GGHKPKEAWA LSGNNEWIAE RFHELVPDMA LNFSFELDSF
QKEAIYYLEK GDSVFVAAHT SAGKTVVAEY AFALASKHCT RAVYTAPIKT ISNQKYRDFC
GKFDVGLLTG DVSLRPEASC LIMTTEILRS MLYRGADIIR DIEWVIFDEV HYVNDAERGV
VWEEVIIMLP RHINIILLSA TVPNTVEFAD WIGRTKQKKI QVTGTTRRPV PLEHCLFFSG
ELYKICENET FIPQGLKAAK DAHKKKNTSA VGIGSAAMRE GAQGQKREFS NRNKQNKHSG
PQNFGSGGNQ QSASGQNNWG SRRSEASLLL QLVNRLSKKS LLPVVIFCFS KNRCDKSADS
MSGTDLTSKS EKSEIRVFCD KAFSRLKGSD RNLPQIVRVQ SLLRRGIGVH HAGLLPIVKE
VVEMLFCRGV IKVLFSTETF AMGVNAPART VVFDTLRKFD GKEFRQLLPG EYTQMAGRAG
RRGLDKIGTV VVMCRDEIPE ESDLRLVIVG SATRLESQFR LTYIMILHLL RVEELKVEDM
LKRSFAEFHA QKKLPETQQI LRRKLAQPTK AIECIKGEPA IEEYYDMYLE AEEYGNQISE
AVMQSPAAQH FLTPGRVVVV KSHSAQDHLL GVVVKGPSAT MKQYIVLFLK PDLPSSMPVS
ELQDKKSGDS PQAYLLMPKS KRGGEEYFYS AATRKGSGAI NIKLPYQGSA AGVSYEVRGM
DTKDFLCICN SKIKIDQVGL LEDVSNSAFS KTVQQLSELK SDGNKYPPAL DPLKDLKMKD
WNLVEAYKKW TSLLQKMAVN KCHGCIKLEE HIALARELKK HKDEIDNLRF QMSDEALQQM
PDFQGRMDVL KEIGCIDADL VVQIKGRVAC EMNSGEELIC TECLFENQLD NLEPEEAVAI
MSAFVFQQRK TSEPSLTPKL SEAKKRLYDT AIRLGELQVN CKLQISPEEY AQENLKFGLV
EVVYEWAKGT PFADICELTD VPEGLIVRTI VRLDETCREF RNAAAIMGNS ALYKKMEAAS
NSIKRDIVFA ASLYITGV
//
