ID A0A072UK20_MEDTR Unreviewed; 1502 AA.
AC A0A072UK20;
DT 01-OCT-2014, integrated into UniProtKB/TrEMBL.
DT 01-OCT-2014, sequence version 1.
DT 27-MAR-2024, entry version 43.
DE RecName: Full=Protein Ycf2 {ECO:0000256|ARBA:ARBA00018950};
GN OrderedLocusNames=MTR_4g051435 {ECO:0000313|EMBL:KEH29756.1};
OS Medicago truncatula (Barrel medic) (Medicago tribuloides).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; Hologalegina; IRL clade; Trifolieae; Medicago.
OX NCBI_TaxID=3880 {ECO:0000313|EMBL:KEH29756.1, ECO:0000313|Proteomes:UP000002051};
RN [1] {ECO:0000313|EMBL:KEH29756.1, ECO:0000313|Proteomes:UP000002051}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=A17 {ECO:0000313|EMBL:KEH29756.1}, and cv. Jemalong A17
RC {ECO:0000313|EnsemblPlants:KEH29756,
RC ECO:0000313|Proteomes:UP000002051};
RX PubMed=22089132; DOI=10.1038/nature10625;
RA Young N.D., Debelle F., Oldroyd G.E., Geurts R., Cannon S.B., Udvardi M.K.,
RA Benedito V.A., Mayer K.F., Gouzy J., Schoof H., Van de Peer Y., Proost S.,
RA Cook D.R., Meyers B.C., Spannagl M., Cheung F., De Mita S.,
RA Krishnakumar V., Gundlach H., Zhou S., Mudge J., Bharti A.K., Murray J.D.,
RA Naoumkina M.A., Rosen B., Silverstein K.A., Tang H., Rombauts S.,
RA Zhao P.X., Zhou P., Barbe V., Bardou P., Bechner M., Bellec A., Berger A.,
RA Berges H., Bidwell S., Bisseling T., Choisne N., Couloux A., Denny R.,
RA Deshpande S., Dai X., Doyle J.J., Dudez A.M., Farmer A.D., Fouteau S.,
RA Franken C., Gibelin C., Gish J., Goldstein S., Gonzalez A.J., Green P.J.,
RA Hallab A., Hartog M., Hua A., Humphray S.J., Jeong D.H., Jing Y.,
RA Jocker A., Kenton S.M., Kim D.J., Klee K., Lai H., Lang C., Lin S.,
RA Macmil S.L., Magdelenat G., Matthews L., McCorrison J., Monaghan E.L.,
RA Mun J.H., Najar F.Z., Nicholson C., Noirot C., O'Bleness M., Paule C.R.,
RA Poulain J., Prion F., Qin B., Qu C., Retzel E.F., Riddle C., Sallet E.,
RA Samain S., Samson N., Sanders I., Saurat O., Scarpelli C., Schiex T.,
RA Segurens B., Severin A.J., Sherrier D.J., Shi R., Sims S., Singer S.R.,
RA Sinharoy S., Sterck L., Viollet A., Wang B.B., Wang K., Wang M., Wang X.,
RA Warfsmann J., Weissenbach J., White D.D., White J.D., Wiley G.B.,
RA Wincker P., Xing Y., Yang L., Yao Z., Ying F., Zhai J., Zhou L., Zuber A.,
RA Denarie J., Dixon R.A., May G.D., Schwartz D.C., Rogers J., Quetier F.,
RA Town C.D., Roe B.A.;
RT "The Medicago genome provides insight into the evolution of rhizobial
RT symbioses.";
RL Nature 480:520-524(2011).
RN [2] {ECO:0000313|EMBL:KEH29756.1, ECO:0000313|Proteomes:UP000002051}
RP GENOME REANNOTATION.
RC STRAIN=A17 {ECO:0000313|EMBL:KEH29756.1}, and cv. Jemalong A17
RC {ECO:0000313|EnsemblPlants:KEH29756,
RC ECO:0000313|Proteomes:UP000002051};
RX PubMed=24767513; DOI=10.1186/1471-2164-15-312;
RA Tang H., Krishnakumar V., Bidwell S., Rosen B., Chan A., Zhou S.,
RA Gentzbittel L., Childs K.L., Yandell M., Gundlach H., Mayer K.F.,
RA Schwartz D.C., Town C.D.;
RT "An improved genome release (version Mt4.0) for the model legume Medicago
RT truncatula.";
RL BMC Genomics 15:312-312(2014).
RN [3] {ECO:0000313|EnsemblPlants:KEH29756}
RP IDENTIFICATION.
RC STRAIN=cv. Jemalong A17 {ECO:0000313|EnsemblPlants:KEH29756};
RG EnsemblPlants;
RL Submitted (APR-2015) to UniProtKB.
CC -!- FUNCTION: Probable ATPase of unknown function. Its presence in a non-
CC photosynthetic plant (Epifagus virginiana) and experiments in tobacco
CC indicate that it has an essential function which is probably not
CC related to photosynthesis. {ECO:0000256|ARBA:ARBA00002329}.
CC -!- SIMILARITY: Belongs to the Ycf2 family.
CC {ECO:0000256|ARBA:ARBA00009361}.
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DR EMBL; CM001220; KEH29756.1; -; Genomic_DNA.
DR RefSeq; XP_013455725.1; XM_013600271.1.
DR STRING; 3880.A0A072UK20; -.
DR EnsemblPlants; KEH29756; KEH29756; MTR_4g051435.
DR Gramene; KEH29756; KEH29756; MTR_4g051435.
DR HOGENOM; CLU_248636_0_0_1; -.
DR Proteomes; UP000002051; Chromosome 4.
DR GO; GO:0005524; F:ATP binding; IEA:InterPro.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR Gene3D; 1.10.8.60; -; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR InterPro; IPR003959; ATPase_AAA_core.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR008543; Uncharacterised_Ycf2.
DR PANTHER; PTHR33078:SF117; PROTEIN YCF2; 1.
DR PANTHER; PTHR33078; PROTEIN YCF2-RELATED; 1.
DR Pfam; PF00004; AAA; 1.
DR Pfam; PF05695; DUF825; 4.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
PE 3: Inferred from homology;
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Reference proteome {ECO:0000313|Proteomes:UP000002051}.
FT DOMAIN 936..1012
FT /note="ATPase AAA-type core"
FT /evidence="ECO:0000259|Pfam:PF00004"
FT REGION 1461..1502
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1471..1502
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1502 AA; 175486 MW; 819EEC9510912CAE CRC64;
MIERKNVYLT GLLPISMNSV GPSNDTMDDS KDSFNINWYS KLIVPLLYRK KISDRDEDSK
YHTRMNNHLF PKEIKEFVGN PTRAGRSFLY DRWSELQLDL NPTERLFKKE EGVSFVLLRQ
SENKEIANIV KIHMYLQNTV SIHPISSDPG CDGVAKDELY SSDSFLNKNR LFGLFDLFHD
RNRAGYLLHH DFESEERFQE MANLFNLSIT KPDLVYHKGF SFSIHSSGLD QKQKFVNEVN
SRDESKKKFL LVLPPLFYEE NESFYPNNTY GYIKNLWNRF HRNSEYGIQR SMNKDPNAYK
YKWSNGSKNF QEQLDRFISE QNSRFQVVFN RFQVVFDRLH MNAYSIDWSE VIDWSEVIDK
KDLSKSLYFF LSKFLPFLSN SLYFFLSKFL PFLSNSLPFF FVSFGNIPVH RSEIHVYELK
RPNDPLGNQL LESIGLQIVH LKKRKPFLLD DFYTSKKSKL SFNEGTISPF LFNKRENWIS
FHTRKKKKKE EEKKKRRKSF YNMDFSMISH DQENWRNPLK PFHRSSLISS FLKAHRLRFF
NNQYAVRSCN YDFLKYVLTG IDDSEGKNHE YLKLKSQMMD GSKRILREKL CLSPRNPIRE
ILSKCRHNFL VHVCEDILEN ESPLISTHLR EFFVLNLILL LVTGYLVQTH LVFVSRFSNE
LQTEFEEVKS LMIPSYMIEL EKLLDRYPIS ELNSFGLKDM FLVALKQLGN FLEERRGSAS
AGNMPRGGGP AYVVKSIRSK KNDLNLIDLI RIIPNPINRI AFLRNTRHLS HTSKAIYTLI
RKRKNLNSDW IDDKIESWIL NSDFIADKER EFMVQFSTLT TEKRIDQILR SLTNSDRLSK
NNSVSVNKFL DNYPKGFDIN DLFDEDDDDD DLFDEREGTI YSLLPRTEDR GYNLDRYDSD
YLDRNYDSHL EFLSMDYPIP EDIIPEIDQF FLTLQFELAK AMSPCIIWIP NIHDLDGNES
NDLSLGLLVN SLSRDSEKSS TRNILVIAST HIPQKVDPAL IAPNKLNTCI KIRRLLIPQQ
RKHFFSLART RGFHLEKKIF DTNGCGSITL GSNVRDLVAL TNEALSISII QKKSIIDTNI
IRHALHRQTW DFRSQIRSVE DHGILFYQIG RAVSQNLLLS NFSIDPISIY MKKKSCNGVD
SDLYKWYLEL GTSMKKLTIL LYLLSCSAGS VAQNLWSLTG PNEKNDGITS YRLLYNDSDL
VHGLLEIEGA LLGSSQTGSP FENDGVTFLL RPEPRNPINM IQNGSRSILD HRFLYEKNES
GFEEGEGVLD PLEEDLLNHI VWAPRIWRPW EFLFDDCIER SNEFGFPYWE RSFWDKQISY
DEEGELQEND SEFLQDGTME YQTQKRSFKE QGVFRISQFI WDPSDPLFLL FQDDPSVSVF
SHRELVADEE INLTMANQYH YFYNAALQAQ SNVRCSFNMS IGILDEDDAI LSSLKANDLK
PPQQRPKTSA TAAQRMIANS MGIKLPSPSH VTGSREHKRH EDTRRERIVN RQKLKDEAWG
DD
//
