ID A0A072VHD8_MEDTR Unreviewed; 392 AA.
AC A0A072VHD8;
DT 01-OCT-2014, integrated into UniProtKB/TrEMBL.
DT 01-OCT-2014, sequence version 1.
DT 27-MAR-2024, entry version 32.
DE SubName: Full=F-box protein {ECO:0000313|EMBL:KEH37570.1};
DE SubName: Full=Putative F-box domain-containing protein {ECO:0000313|EMBL:RHN73625.1};
GN Name=25486498 {ECO:0000313|EnsemblPlants:KEH37570};
GN OrderedLocusNames=MTR_2g041510 {ECO:0000313|EMBL:KEH37570.1};
GN ORFNames=MtrunA17_Chr2g0300541 {ECO:0000313|EMBL:RHN73625.1};
OS Medicago truncatula (Barrel medic) (Medicago tribuloides).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; Hologalegina; IRL clade; Trifolieae; Medicago.
OX NCBI_TaxID=3880 {ECO:0000313|EMBL:KEH37570.1, ECO:0000313|Proteomes:UP000002051};
RN [1] {ECO:0000313|EMBL:KEH37570.1, ECO:0000313|Proteomes:UP000002051}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=A17 {ECO:0000313|EMBL:KEH37570.1}, and cv. Jemalong A17
RC {ECO:0000313|EnsemblPlants:KEH37570,
RC ECO:0000313|Proteomes:UP000002051};
RX PubMed=22089132; DOI=10.1038/nature10625;
RA Young N.D., Debelle F., Oldroyd G.E., Geurts R., Cannon S.B., Udvardi M.K.,
RA Benedito V.A., Mayer K.F., Gouzy J., Schoof H., Van de Peer Y., Proost S.,
RA Cook D.R., Meyers B.C., Spannagl M., Cheung F., De Mita S.,
RA Krishnakumar V., Gundlach H., Zhou S., Mudge J., Bharti A.K., Murray J.D.,
RA Naoumkina M.A., Rosen B., Silverstein K.A., Tang H., Rombauts S.,
RA Zhao P.X., Zhou P., Barbe V., Bardou P., Bechner M., Bellec A., Berger A.,
RA Berges H., Bidwell S., Bisseling T., Choisne N., Couloux A., Denny R.,
RA Deshpande S., Dai X., Doyle J.J., Dudez A.M., Farmer A.D., Fouteau S.,
RA Franken C., Gibelin C., Gish J., Goldstein S., Gonzalez A.J., Green P.J.,
RA Hallab A., Hartog M., Hua A., Humphray S.J., Jeong D.H., Jing Y.,
RA Jocker A., Kenton S.M., Kim D.J., Klee K., Lai H., Lang C., Lin S.,
RA Macmil S.L., Magdelenat G., Matthews L., McCorrison J., Monaghan E.L.,
RA Mun J.H., Najar F.Z., Nicholson C., Noirot C., O'Bleness M., Paule C.R.,
RA Poulain J., Prion F., Qin B., Qu C., Retzel E.F., Riddle C., Sallet E.,
RA Samain S., Samson N., Sanders I., Saurat O., Scarpelli C., Schiex T.,
RA Segurens B., Severin A.J., Sherrier D.J., Shi R., Sims S., Singer S.R.,
RA Sinharoy S., Sterck L., Viollet A., Wang B.B., Wang K., Wang M., Wang X.,
RA Warfsmann J., Weissenbach J., White D.D., White J.D., Wiley G.B.,
RA Wincker P., Xing Y., Yang L., Yao Z., Ying F., Zhai J., Zhou L., Zuber A.,
RA Denarie J., Dixon R.A., May G.D., Schwartz D.C., Rogers J., Quetier F.,
RA Town C.D., Roe B.A.;
RT "The Medicago genome provides insight into the evolution of rhizobial
RT symbioses.";
RL Nature 480:520-524(2011).
RN [2] {ECO:0000313|EMBL:KEH37570.1, ECO:0000313|Proteomes:UP000002051}
RP GENOME REANNOTATION.
RC STRAIN=A17 {ECO:0000313|EMBL:KEH37570.1}, and cv. Jemalong A17
RC {ECO:0000313|EnsemblPlants:KEH37570,
RC ECO:0000313|Proteomes:UP000002051};
RX PubMed=24767513; DOI=10.1186/1471-2164-15-312;
RA Tang H., Krishnakumar V., Bidwell S., Rosen B., Chan A., Zhou S.,
RA Gentzbittel L., Childs K.L., Yandell M., Gundlach H., Mayer K.F.,
RA Schwartz D.C., Town C.D.;
RT "An improved genome release (version Mt4.0) for the model legume Medicago
RT truncatula.";
RL BMC Genomics 15:312-312(2014).
RN [3] {ECO:0000313|EnsemblPlants:KEH37570}
RP IDENTIFICATION.
RC STRAIN=cv. Jemalong A17 {ECO:0000313|EnsemblPlants:KEH37570};
RG EnsemblPlants;
RL Submitted (APR-2015) to UniProtKB.
RN [4] {ECO:0000313|Proteomes:UP000265566}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Jemalong A17 {ECO:0000313|Proteomes:UP000265566};
RX PubMed=30397259; DOI=10.1038/s41477-018-0286-7;
RA Pecrix Y., Staton S.E., Sallet E., Lelandais-Briere C., Moreau S.,
RA Carrere S., Blein T., Jardinaud M.F., Latrasse D., Zouine M., Zahm M.,
RA Kreplak J., Mayjonade B., Satge C., Perez M., Cauet S., Marande W.,
RA Chantry-Darmon C., Lopez-Roques C., Bouchez O., Berard A., Debelle F.,
RA Munos S., Bendahmane A., Berges H., Niebel A., Buitink J., Frugier F.,
RA Benhamed M., Crespi M., Gouzy J., Gamas P.;
RT "Whole-genome landscape of Medicago truncatula symbiotic genes.";
RL Nat. Plants 4:1017-1025(2018).
RN [5] {ECO:0000313|EMBL:RHN73625.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Leaves {ECO:0000313|EMBL:RHN73625.1};
RA Pecrix Y., Gamas P., Carrere S.;
RT "Whole-genome landscape of Medicago truncatula symbiotic genes.";
RL Nat. Plants 0:0-0(2018).
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DR EMBL; CM001218; KEH37570.1; -; Genomic_DNA.
DR EMBL; PSQE01000002; RHN73625.1; -; Genomic_DNA.
DR RefSeq; XP_013463535.1; XM_013608081.1.
DR AlphaFoldDB; A0A072VHD8; -.
DR STRING; 3880.A0A072VHD8; -.
DR EnsemblPlants; KEH37570; KEH37570; MTR_2g041510.
DR GeneID; 25486498; -.
DR Gramene; KEH37570; KEH37570; MTR_2g041510.
DR KEGG; mtr:25486498; -.
DR OrthoDB; 690711at2759; -.
DR Proteomes; UP000002051; Chromosome 2.
DR Proteomes; UP000265566; Chromosome 2.
DR ExpressionAtlas; A0A072VHD8; differential.
DR Gene3D; 1.20.1280.50; -; 1.
DR InterPro; IPR005174; DUF295.
DR InterPro; IPR036047; F-box-like_dom_sf.
DR PANTHER; PTHR47123:SF6; F-BOX PROTEIN; 1.
DR PANTHER; PTHR47123; F-BOX PROTEIN SKIP23; 1.
DR Pfam; PF03478; DUF295; 1.
DR SUPFAM; SSF81383; F-box domain; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000002051}.
FT DOMAIN 89..358
FT /note="DUF295"
FT /evidence="ECO:0000259|Pfam:PF03478"
SQ SEQUENCE 392 AA; 45206 MW; 6FE49A9557900FEB CRC64;
MISLFSKVNK SLRSDTSSSS MDEKVDWSQL PKELWPKIGK YLDNHIDVLR FRSVCESFRS
SIPLSLPNSP SFPLQISPNN YLNQSTIYLI QPTDASSNST LPPSSSSKGW LIKVQESKNQ
SLSLLSPITD KILSNPLSSN NTSLMIWNML DYRVIELCKS YKIEKITGFS NPVKKVVFYP
NSPWSSVEDC VSCCIFQEDI VGFIKHGDEK WKLVDENNFY YDDIIVFKGQ FYVTDKWGTI
SWIDISSLKL IQFSPPLCGF GNKKHLVESC GNLYVVDRYS YYEDENMGGN YDGRRHQARY
EVVECFKVYK LDEEWGKWVD VKDLKNRAFI LSPSCNFSVS AKELIGYQGN CIYFKDSFSV
RMYNLDDCRI TTVEFNPCID NTLWCHAPRQ RC
//
