ID A0A077ZJB8_TRITR Unreviewed; 452 AA.
AC A0A077ZJB8;
DT 29-OCT-2014, integrated into UniProtKB/TrEMBL.
DT 29-OCT-2014, sequence version 1.
DT 27-MAR-2024, entry version 41.
DE RecName: Full=Large ribosomal subunit protein uL6 {ECO:0000256|ARBA:ARBA00035246};
DE AltName: Full=60S ribosomal protein L9 {ECO:0000256|ARBA:ARBA00035349};
GN ORFNames=TTRE_0000808801 {ECO:0000313|EMBL:CDW59748.1};
OS Trichuris trichiura (Whipworm) (Trichocephalus trichiurus).
OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Enoplea; Dorylaimia;
OC Trichinellida; Trichuridae; Trichuris.
OX NCBI_TaxID=36087 {ECO:0000313|EMBL:CDW59748.1};
RN [1] {ECO:0000313|EMBL:CDW59748.1}
RP NUCLEOTIDE SEQUENCE.
RA Aslett M.;
RL Submitted (JAN-2014) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:CDW59748.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RA Foth B.J., Tsai I.J., Reid A.J., Bancroft A.J., Nichol S., Tracey A.,
RA Holroyd N., Cotton J.A., Stanley E.J., Zarowiecki M., Liu J.Z.,
RA Huckvale T., Cooper P.J., Grencis R.K., Berriman M.;
RT "The whipworm genome and dual-species transcriptomics of an intimate host-
RT pathogen interaction.";
RL Submitted (MAR-2014) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the universal ribosomal protein uL6 family.
CC {ECO:0000256|ARBA:ARBA00009356, ECO:0000256|RuleBase:RU003869}.
CC -!- SIMILARITY: Belongs to the universal ribosomal protein uS5 family.
CC {ECO:0000256|ARBA:ARBA00008945, ECO:0000256|RuleBase:RU003823}.
CC -!- SIMILARITY: Belongs to the universal ribosomal protein uS8 family.
CC {ECO:0000256|ARBA:ARBA00006471, ECO:0000256|RuleBase:RU003660}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; HG806715; CDW59748.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A077ZJB8; -.
DR STRING; 36087.A0A077ZJB8; -.
DR GO; GO:0015935; C:small ribosomal subunit; IEA:InterPro.
DR GO; GO:0019843; F:rRNA binding; IEA:InterPro.
DR GO; GO:0003735; F:structural constituent of ribosome; IEA:UniProtKB-UniRule.
DR GO; GO:0006412; P:translation; IEA:InterPro.
DR Gene3D; 3.30.1370.30; -; 1.
DR Gene3D; 3.30.1490.10; -; 1.
DR Gene3D; 3.30.160.20; -; 1.
DR Gene3D; 3.30.230.10; -; 1.
DR Gene3D; 3.90.930.12; Ribosomal protein L6, alpha-beta domain; 2.
DR HAMAP; MF_01365_B; Ribosomal_L6_B; 1.
DR HAMAP; MF_01307_B; Ribosomal_S5_B; 1.
DR HAMAP; MF_01302_B; Ribosomal_S8_B; 1.
DR InterPro; IPR020568; Ribosomal_Su5_D2-typ_SF.
DR InterPro; IPR000702; Ribosomal_uL6-like.
DR InterPro; IPR036789; Ribosomal_uL6-like_a/b-dom_sf.
DR InterPro; IPR020040; Ribosomal_uL6_a/b-dom.
DR InterPro; IPR019906; Ribosomal_uL6_bac-type.
DR InterPro; IPR002358; Ribosomal_uL6_CS.
DR InterPro; IPR005712; Ribosomal_uS5_bac-type.
DR InterPro; IPR005324; Ribosomal_uS5_C.
DR InterPro; IPR013810; Ribosomal_uS5_N.
DR InterPro; IPR018192; Ribosomal_uS5_N_CS.
DR InterPro; IPR000630; Ribosomal_uS8.
DR InterPro; IPR047863; Ribosomal_uS8_CS.
DR InterPro; IPR035987; Ribosomal_uS8_sf.
DR InterPro; IPR014721; Ribsml_uS5_D2-typ_fold_subgr.
DR NCBIfam; TIGR03654; L6_bact; 1.
DR NCBIfam; TIGR01021; rpsE_bact; 1.
DR PANTHER; PTHR11655:SF14; 54S RIBOSOMAL PROTEIN L6, MITOCHONDRIAL; 1.
DR PANTHER; PTHR11655; 60S/50S RIBOSOMAL PROTEIN L6/L9; 1.
DR Pfam; PF00347; Ribosomal_L6; 2.
DR Pfam; PF00333; Ribosomal_S5; 1.
DR Pfam; PF03719; Ribosomal_S5_C; 1.
DR Pfam; PF00410; Ribosomal_S8; 1.
DR PRINTS; PR00059; RIBOSOMALL6.
DR SUPFAM; SSF54768; dsRNA-binding domain-like; 1.
DR SUPFAM; SSF56053; Ribosomal protein L6; 2.
DR SUPFAM; SSF54211; Ribosomal protein S5 domain 2-like; 1.
DR SUPFAM; SSF56047; Ribosomal protein S8; 1.
DR PROSITE; PS00525; RIBOSOMAL_L6_1; 1.
DR PROSITE; PS00585; RIBOSOMAL_S5; 1.
DR PROSITE; PS00053; RIBOSOMAL_S8; 1.
DR PROSITE; PS50881; S5_DSRBD; 1.
PE 3: Inferred from homology;
KW Ribonucleoprotein {ECO:0000256|ARBA:ARBA00023274, ECO:0000256|PROSITE-
KW ProRule:PRU00268};
KW Ribosomal protein {ECO:0000256|ARBA:ARBA00022980, ECO:0000256|PROSITE-
KW ProRule:PRU00268}.
FT DOMAIN 297..360
FT /note="S5 DRBM"
FT /evidence="ECO:0000259|PROSITE:PS50881"
SQ SEQUENCE 452 AA; 48936 MW; F4CD4C6BD7D7D21B CRC64;
MVMTDPIADF LTRIRNANMV KHDTVEVPAS KIKRDIAEIL KREGFVRDVE YIEDDKQGMI
RVFLKYGKND ERVITNLKRI SKPGLRAYVK ADEVPKVLNG LGIAIISTSE GLVTDKEARG
VEVTQKGNEV TVKGPKGELT RTFSSDIKMN IEGSEVTFTR PDDSKEMKTI HGTTRANFNN
MVVGVSEGFQ KALELIGVGY RAQLQGSKLV LNVGYSHPVE MVAPEGVTIE VPSNTQIVVK
GSNKEVVGEL AAKIRGTRPP EPYKGKGVRY VGEYVRRKEG EGGTPFMVYI DPKHLELEDR
VVAINRVTKV VKGGRRLRFA ALVVVGDKNG HVGFGTGKAQ EVPEAIRKAI EDAKKNLVEV
PMVGTTLPHE VIGVFGGGRI LMKPAVEGSG VAAGGPVRAV LELAGVADVT SKSLGSNTPI
NVVRATVEGL TQLKKAEEVA QLRGISVENL AN
//
