ID A0A078FT31_BRANA Unreviewed; 733 AA.
AC A0A078FT31;
DT 29-OCT-2014, integrated into UniProtKB/TrEMBL.
DT 29-OCT-2014, sequence version 1.
DT 27-MAR-2024, entry version 31.
DE SubName: Full=BnaA08g27420D protein {ECO:0000313|EMBL:CDY15458.1};
GN Name=BnaA08g27420D {ECO:0000313|EMBL:CDY15458.1};
GN ORFNames=GSBRNA2T00089626001 {ECO:0000313|EMBL:CDY15458.1};
OS Brassica napus (Rape).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica.
OX NCBI_TaxID=3708 {ECO:0000313|EMBL:CDY15458.1, ECO:0000313|Proteomes:UP000028999};
RN [1] {ECO:0000313|EMBL:CDY15458.1, ECO:0000313|Proteomes:UP000028999}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Darmor-bzh {ECO:0000313|Proteomes:UP000028999};
RX PubMed=25146293; DOI=10.1126/science.1253435;
RA Chalhoub B., Denoeud F., Liu S., Parkin I.A., Tang H., Wang X., Chiquet J.,
RA Belcram H., Tong C., Samans B., Correa M., Da Silva C., Just J.,
RA Falentin C., Koh C.S., Le Clainche I., Bernard M., Bento P., Noel B.,
RA Labadie K., Alberti A., Charles M., Arnaud D., Guo H., Daviaud C.,
RA Alamery S., Jabbari K., Zhao M., Edger P.P., Chelaifa H., Tack D.,
RA Lassalle G., Mestiri I., Schnel N., Le Paslier M.C., Fan G., Renault V.,
RA Bayer P.E., Golicz A.A., Manoli S., Lee T.H., Thi V.H., Chalabi S., Hu Q.,
RA Fan C., Tollenaere R., Lu Y., Battail C., Shen J., Sidebottom C.H.,
RA Wang X., Canaguier A., Chauveau A., Berard A., Deniot G., Guan M., Liu Z.,
RA Sun F., Lim Y.P., Lyons E., Town C.D., Bancroft I., Wang X., Meng J.,
RA Ma J., Pires J.C., King G.J., Brunel D., Delourme R., Renard M., Aury J.M.,
RA Adams K.L., Batley J., Snowdon R.J., Tost J., Edwards D., Zhou Y., Hua W.,
RA Sharpe A.G., Paterson A.H., Guan C., Wincker P.;
RT "Plant genetics. Early allopolyploid evolution in the post-Neolithic
RT Brassica napus oilseed genome.";
RL Science 345:950-953(2014).
CC -!- SUBCELLULAR LOCATION: Plastid, chloroplast
CC {ECO:0000256|ARBA:ARBA00004229}.
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DR EMBL; LK032055; CDY15458.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A078FT31; -.
DR STRING; 3708.A0A078FT31; -.
DR PaxDb; 3708-A0A078FT31; -.
DR EnsemblPlants; CDY15458; CDY15458; GSBRNA2T00089626001.
DR Gramene; CDY15458; CDY15458; GSBRNA2T00089626001.
DR OMA; PILEQMM; -.
DR Proteomes; UP000028999; Unassembled WGS sequence.
DR GO; GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
DR GO; GO:0019156; F:isoamylase activity; IEA:InterPro.
DR GO; GO:0019252; P:starch biosynthetic process; IEA:InterPro.
DR CDD; cd11346; AmyAc_plant_IsoA; 1.
DR CDD; cd02856; E_set_GDE_Isoamylase_N; 1.
DR Gene3D; 3.20.20.80; Glycosidases; 1.
DR Gene3D; 2.60.40.1180; Golgi alpha-mannosidase II; 1.
DR Gene3D; 2.60.40.10; Immunoglobulins; 1.
DR InterPro; IPR044096; AmyAc_plant_ISA2.
DR InterPro; IPR044505; GlgX_Isoamylase_N_E_set.
DR InterPro; IPR006047; Glyco_hydro_13_cat_dom.
DR InterPro; IPR004193; Glyco_hydro_13_N.
DR InterPro; IPR013780; Glyco_hydro_b.
DR InterPro; IPR017853; Glycoside_hydrolase_SF.
DR InterPro; IPR013783; Ig-like_fold.
DR InterPro; IPR014756; Ig_E-set.
DR InterPro; IPR048650; ISOA1-3-like_C.
DR PANTHER; PTHR43002; GLYCOGEN DEBRANCHING ENZYME; 1.
DR PANTHER; PTHR43002:SF7; GLYCOSYL HYDROLASE FAMILY 13 CATALYTIC DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF00128; Alpha-amylase; 1.
DR Pfam; PF02922; CBM_48; 1.
DR Pfam; PF21156; ISOA1-3_C; 1.
DR SMART; SM00642; Aamy; 1.
DR SUPFAM; SSF51445; (Trans)glycosidases; 1.
DR SUPFAM; SSF81296; E set domains; 1.
DR SUPFAM; SSF51011; Glycosyl hydrolase domain; 1.
PE 4: Predicted;
KW Chloroplast {ECO:0000256|ARBA:ARBA00022528};
KW Plastid {ECO:0000256|ARBA:ARBA00022640};
KW Reference proteome {ECO:0000313|Proteomes:UP000028999};
KW Transit peptide {ECO:0000256|ARBA:ARBA00022946}.
FT DOMAIN 233..608
FT /note="Glycosyl hydrolase family 13 catalytic"
FT /evidence="ECO:0000259|SMART:SM00642"
SQ SEQUENCE 733 AA; 82605 MW; 19AEC80AFF02830F CRC64;
MVYVSSLEPN GADNKSSLVM VWGVYRSDSS CFLPLDFENS DQDSQTPFLK RSLSESMLEL
EFDGKESPFY LSFRLKLVSA NDLEMLTHRD TNFCAPVGFT AGHPLPLGLS SGPDGGGSWN
FAFFSRNSKS LVLCLYDDST TDRPALELDL DPYVNRTGDV WHASVDKTWG FVRYGYRCKE
STNSEDDEAE SIVLDPYARV IEKTISPKFL GSISKNSSFD WGRDVSPNIP LEKLIVYRFN
VKGFTQHKSS KLPTNVAGTF SGVAEKVNHL KALGTNAVLL EPIFSFSEQK GPYFPFHFFS
PMDIYGHESA VNSMKGMVKR LHSEGIEVLL EVVFTHTAES GALQGIDDSS YYYNGKDSKS
YLNCNYPVVQ QLILESLRYW VTEFHVDGFC FINASSLLRG VHGEQLSRPP LVEAISFDPQ
LARTKLIADC WDPHDMKMPK EVLFPHWKRW AELNTRYCRD VRNFVRGRGI LSDLATRVCG
SGDIFTDGRG PAFSFNYISR NSGLSLVDLV SFSGPELASE LSWNCGEEGE TNKSAVLQTR
LKQIRNFLFI QYISVGIPVL NMGDECGVST KGSPLLESKK PFDWNMLASG FGAQITQFIS
FMTSVRARRS DVFQRSKFLR PENIVWYAND QTTPNWEDTD SRFLALRIRA ESEEETTEPK
NNDMFVGFNA SDHPEKVTLP TLPEGRSKWR RLVDTSLPFP GFFSVEGETV VTEDELVVYE
MKPYSCTLFE TTA
//
