ID A0A078GFU6_BRANA Unreviewed; 793 AA.
AC A0A078GFU6;
DT 29-OCT-2014, integrated into UniProtKB/TrEMBL.
DT 29-OCT-2014, sequence version 1.
DT 27-MAR-2024, entry version 48.
DE SubName: Full=BnaC03g16940D protein {ECO:0000313|EMBL:CDY23997.1};
GN Name=BnaC03g16940D {ECO:0000313|EMBL:CDY23997.1};
GN ORFNames=GSBRNA2T00024513001 {ECO:0000313|EMBL:CDY23997.1};
OS Brassica napus (Rape).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica.
OX NCBI_TaxID=3708 {ECO:0000313|EMBL:CDY23997.1, ECO:0000313|Proteomes:UP000028999};
RN [1] {ECO:0000313|EMBL:CDY23997.1, ECO:0000313|Proteomes:UP000028999}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Darmor-bzh {ECO:0000313|Proteomes:UP000028999};
RX PubMed=25146293; DOI=10.1126/science.1253435;
RA Chalhoub B., Denoeud F., Liu S., Parkin I.A., Tang H., Wang X., Chiquet J.,
RA Belcram H., Tong C., Samans B., Correa M., Da Silva C., Just J.,
RA Falentin C., Koh C.S., Le Clainche I., Bernard M., Bento P., Noel B.,
RA Labadie K., Alberti A., Charles M., Arnaud D., Guo H., Daviaud C.,
RA Alamery S., Jabbari K., Zhao M., Edger P.P., Chelaifa H., Tack D.,
RA Lassalle G., Mestiri I., Schnel N., Le Paslier M.C., Fan G., Renault V.,
RA Bayer P.E., Golicz A.A., Manoli S., Lee T.H., Thi V.H., Chalabi S., Hu Q.,
RA Fan C., Tollenaere R., Lu Y., Battail C., Shen J., Sidebottom C.H.,
RA Wang X., Canaguier A., Chauveau A., Berard A., Deniot G., Guan M., Liu Z.,
RA Sun F., Lim Y.P., Lyons E., Town C.D., Bancroft I., Wang X., Meng J.,
RA Ma J., Pires J.C., King G.J., Brunel D., Delourme R., Renard M., Aury J.M.,
RA Adams K.L., Batley J., Snowdon R.J., Tost J., Edwards D., Zhou Y., Hua W.,
RA Sharpe A.G., Paterson A.H., Guan C., Wincker P.;
RT "Plant genetics. Early allopolyploid evolution in the post-Neolithic
RT Brassica napus oilseed genome.";
RL Science 345:950-953(2014).
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DR EMBL; LK032152; CDY23997.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A078GFU6; -.
DR SMR; A0A078GFU6; -.
DR STRING; 3708.A0A078GFU6; -.
DR PaxDb; 3708-A0A078GFU6; -.
DR EnsemblPlants; CDY23997; CDY23997; GSBRNA2T00024513001.
DR Gramene; CDY23997; CDY23997; GSBRNA2T00024513001.
DR Proteomes; UP000028999; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR CDD; cd10017; B3_DNA; 1.
DR Gene3D; 3.30.40.100; -; 1.
DR Gene3D; 2.40.330.10; DNA-binding pseudobarrel domain; 1.
DR InterPro; IPR003340; B3_DNA-bd.
DR InterPro; IPR015300; DNA-bd_pseudobarrel_sf.
DR InterPro; IPR011124; Znf_CW.
DR PANTHER; PTHR46245; B3 DOMAIN-CONTAINING PROTEIN OS07G0563300; 1.
DR PANTHER; PTHR46245:SF16; TF-B3 DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF02362; B3; 1.
DR Pfam; PF07496; zf-CW; 1.
DR SMART; SM01019; B3; 1.
DR SUPFAM; SSF101936; DNA-binding pseudobarrel domain; 1.
DR PROSITE; PS50863; B3; 1.
DR PROSITE; PS51050; ZF_CW; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000028999};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771}.
FT DOMAIN 292..393
FT /note="TF-B3"
FT /evidence="ECO:0000259|PROSITE:PS50863"
FT DOMAIN 548..598
FT /note="CW-type"
FT /evidence="ECO:0000259|PROSITE:PS51050"
FT REGION 163..187
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 221..262
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 719..746
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 172..187
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 221..246
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 793 AA; 87432 MW; 1957FFF9B63606B5 CRC64;
MFEVKTGSKV CMNASCGSTS TVEWKKGWPL RSGSLADLCF RCGSAYETSL FCETFHLEQS
GWRDCYLCNK RLHCGCIASK LMVEFMDYGG VGCTSCTNCH QLNLNKRGEN PVVFSRLAMN
SQHTNGESGI SSIRSEADLF SQPLVPGDDK REEFMAQRGF ANFMKPDNNN AGEMHEPSST
PSQPSLNMAL ATLPYSPSFA TPVVDGKTLM GAASQSQSHI GQCSASSILQ KPSKSVPGTP
PGTSKSAQAR IGRPPVEGRG KGHLLPRYWP KYTDKELQQI SGNLNLNIVP LFEKTLSASD
AGRIGRLVLP KACAEAYFPP ISQSEGIPLK IQDVRGKEWT FQFRFWPNNN SRMYVLEGVT
PCIQSMMLQA GDTVTFSRVD PGGKLIMGAR KAAYTVDMQV WVSTSYIRAR THPAQPNPKL
IRPNRDPIDL EPNPTSINAS SCPSQTPEEL KGLPEHLSLK KSEMNGGRIC DDPSRVKDKK
RTRTIGAKNK RLLLHSEELR VTWEEAQELL RPSPNAKPTV VVVEDHEFEE FDEPPVFGKR
TIITSRPSGE QERWASCDDC TKWRRLPVDA LLPAKWTCSD NVWDVSRCSC CAPEESLKDL
ENVLRAGKEY KKRRIQAAKT EEEPSGLDAL ASAASAAVLG DALGGDSEVA TTTRHPRHRV
GCSCIVCIQP PSGKGRHKPT CGCTVCSTVK RRFKTLMMRR KKKQLERDEI AAAAEAYEEH
NNKEAAEQGE TDENNGEKEG RIDLNCDPYN REDVEAVKEE SKRRECSGVA DDVLGLTELG
GEAASCEELK AAT
//
