ID A0A078GS09_BRANA Unreviewed; 687 AA.
AC A0A078GS09;
DT 29-OCT-2014, integrated into UniProtKB/TrEMBL.
DT 29-OCT-2014, sequence version 1.
DT 27-MAR-2024, entry version 33.
DE SubName: Full=BnaCnng05390D protein {ECO:0000313|EMBL:CDY27954.1};
GN Name=BnaCnng05390D {ECO:0000313|EMBL:CDY27954.1};
GN ORFNames=GSBRNA2T00038873001 {ECO:0000313|EMBL:CDY27954.1};
OS Brassica napus (Rape).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica.
OX NCBI_TaxID=3708 {ECO:0000313|EMBL:CDY27954.1, ECO:0000313|Proteomes:UP000028999};
RN [1] {ECO:0000313|EMBL:CDY27954.1, ECO:0000313|Proteomes:UP000028999}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Darmor-bzh {ECO:0000313|Proteomes:UP000028999};
RX PubMed=25146293; DOI=10.1126/science.1253435;
RA Chalhoub B., Denoeud F., Liu S., Parkin I.A., Tang H., Wang X., Chiquet J.,
RA Belcram H., Tong C., Samans B., Correa M., Da Silva C., Just J.,
RA Falentin C., Koh C.S., Le Clainche I., Bernard M., Bento P., Noel B.,
RA Labadie K., Alberti A., Charles M., Arnaud D., Guo H., Daviaud C.,
RA Alamery S., Jabbari K., Zhao M., Edger P.P., Chelaifa H., Tack D.,
RA Lassalle G., Mestiri I., Schnel N., Le Paslier M.C., Fan G., Renault V.,
RA Bayer P.E., Golicz A.A., Manoli S., Lee T.H., Thi V.H., Chalabi S., Hu Q.,
RA Fan C., Tollenaere R., Lu Y., Battail C., Shen J., Sidebottom C.H.,
RA Wang X., Canaguier A., Chauveau A., Berard A., Deniot G., Guan M., Liu Z.,
RA Sun F., Lim Y.P., Lyons E., Town C.D., Bancroft I., Wang X., Meng J.,
RA Ma J., Pires J.C., King G.J., Brunel D., Delourme R., Renard M., Aury J.M.,
RA Adams K.L., Batley J., Snowdon R.J., Tost J., Edwards D., Zhou Y., Hua W.,
RA Sharpe A.G., Paterson A.H., Guan C., Wincker P.;
RT "Plant genetics. Early allopolyploid evolution in the post-Neolithic
RT Brassica napus oilseed genome.";
RL Science 345:950-953(2014).
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DR EMBL; LK032212; CDY27954.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A078GS09; -.
DR STRING; 3708.A0A078GS09; -.
DR PaxDb; 3708-A0A078GS09; -.
DR EnsemblPlants; CDY27954; CDY27954; GSBRNA2T00038873001.
DR Gramene; CDY27954; CDY27954; GSBRNA2T00038873001.
DR OMA; LNACSDF; -.
DR Proteomes; UP000028999; Unassembled WGS sequence.
DR GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR GO; GO:0009451; P:RNA modification; IEA:InterPro.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 4.
DR InterPro; IPR046848; E_motif.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR045215; PPR_prot_At1g15510.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 4.
DR PANTHER; PTHR24015:SF1672; OS06G0506100 PROTEIN; 1.
DR PANTHER; PTHR24015; OS07G0578800 PROTEIN-RELATED; 1.
DR Pfam; PF20431; E_motif; 1.
DR Pfam; PF12854; PPR_1; 1.
DR Pfam; PF13041; PPR_2; 3.
DR PROSITE; PS51375; PPR; 4.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000028999};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT REPEAT 148..185
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 252..282
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 355..389
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 453..487
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
SQ SEQUENCE 687 AA; 75482 MW; ACD78BE97EA77012 CRC64;
MIKAPAAKAI KKKVERDIYG AGSIGLFTEF DKESLARRPK PGLEEHSGLE KSAEETLDKQ
CSTSIKEMHP STSQTELNPV TPSSTFLHQL TRHSQQRNLK AGRAVHAQII RTGASSCTKH
ANGLVNLYAK CGHLPKAHSI FSSIVSKDVV SWNSLITGYS QHGGLSSSRT VMQLFREMRS
QDVLPNAYTL AGIFKAESSL GSCTVGRQAH ALVVKMSSFG DIYVDTSMLG MYCKAGFVED
GLKVFAFMPE RNTYTWSTMV SGFATRGRVE EAIKVFNLFL REKDEESDCD YVFTAVLSSL
AATEYVGLGR QIHSLTVKNG LLVFVALSNA LVTMYSKCES LTEACKMFDS SDDRNGITWS
AMVTGYSQNG ESLEAVKLFS RMFSAGIKPS EYTIVGVLNA CTTLELGKQV HGHTIKHGFS
LEVPIGSALS TMYSKCGSLE DGSLVFQRTP NKDVVSWNAM ISGLSHNGRG DEALELFEEM
LAVGTEPDDV TFVNVISACS HKGFVERGWS YFNKMSDQFG IVPKVDHYAC MVDLLSRAGQ
LREAKEFIES AGVDHGICLW RILLSACKNH GSCELGAYAG EKLMALGSRE SSTYVQLASI
YTVLGRMRDV ERVWGLMRAN GVSKDVGCSW ITLENQCHTF VVGDTMHYRI EEIKDLVRLV
SRPMMEEGFT TVLDSSHVQE GTQLVLS
//
