ID A0A078HF63_BRANA Unreviewed; 568 AA.
AC A0A078HF63;
DT 29-OCT-2014, integrated into UniProtKB/TrEMBL.
DT 29-OCT-2014, sequence version 1.
DT 27-MAR-2024, entry version 30.
DE SubName: Full=(rape) hypothetical protein {ECO:0000313|EMBL:CAF1711908.1};
DE SubName: Full=BnaC03g67670D protein {ECO:0000313|EMBL:CDY36447.1};
GN Name=BnaC03g67670D {ECO:0000313|EMBL:CDY36447.1};
GN ORFNames=DARMORV10_C03P88050.1 {ECO:0000313|EMBL:CAF1711908.1},
GN GSBRNA2T00062085001 {ECO:0000313|EMBL:CDY36447.1};
OS Brassica napus (Rape).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica.
OX NCBI_TaxID=3708 {ECO:0000313|EMBL:CDY36447.1, ECO:0000313|Proteomes:UP000028999};
RN [1] {ECO:0000313|EMBL:CDY36447.1, ECO:0000313|Proteomes:UP000028999}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Darmor-bzh {ECO:0000313|Proteomes:UP000028999};
RX PubMed=25146293; DOI=10.1126/science.1253435;
RA Chalhoub B., Denoeud F., Liu S., Parkin I.A., Tang H., Wang X., Chiquet J.,
RA Belcram H., Tong C., Samans B., Correa M., Da Silva C., Just J.,
RA Falentin C., Koh C.S., Le Clainche I., Bernard M., Bento P., Noel B.,
RA Labadie K., Alberti A., Charles M., Arnaud D., Guo H., Daviaud C.,
RA Alamery S., Jabbari K., Zhao M., Edger P.P., Chelaifa H., Tack D.,
RA Lassalle G., Mestiri I., Schnel N., Le Paslier M.C., Fan G., Renault V.,
RA Bayer P.E., Golicz A.A., Manoli S., Lee T.H., Thi V.H., Chalabi S., Hu Q.,
RA Fan C., Tollenaere R., Lu Y., Battail C., Shen J., Sidebottom C.H.,
RA Wang X., Canaguier A., Chauveau A., Berard A., Deniot G., Guan M., Liu Z.,
RA Sun F., Lim Y.P., Lyons E., Town C.D., Bancroft I., Wang X., Meng J.,
RA Ma J., Pires J.C., King G.J., Brunel D., Delourme R., Renard M., Aury J.M.,
RA Adams K.L., Batley J., Snowdon R.J., Tost J., Edwards D., Zhou Y., Hua W.,
RA Sharpe A.G., Paterson A.H., Guan C., Wincker P.;
RT "Plant genetics. Early allopolyploid evolution in the post-Neolithic
RT Brassica napus oilseed genome.";
RL Science 345:950-953(2014).
RN [2] {ECO:0000313|EMBL:CDY36447.1}
RP NUCLEOTIDE SEQUENCE.
RA Genoscope - CEA;
RL Submitted (JUN-2014) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EMBL:CAF1711908.1}
RP NUCLEOTIDE SEQUENCE.
RG Genoscope - CEA;
RA William W.;
RL Submitted (JAN-2021) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; HG994367; CAF1711908.1; -; Genomic_DNA.
DR EMBL; LK032376; CDY36447.1; -; Genomic_DNA.
DR STRING; 3708.A0A078HF63; -.
DR PaxDb; 3708-A0A078HF63; -.
DR EnsemblPlants; CDY36447; CDY36447; GSBRNA2T00062085001.
DR Gramene; CDY36447; CDY36447; GSBRNA2T00062085001.
DR OMA; CTETISD; -.
DR OrthoDB; 937144at2759; -.
DR Proteomes; UP000028999; Unassembled WGS sequence.
DR GO; GO:0005829; C:cytosol; IBA:GO_Central.
DR GO; GO:0005739; C:mitochondrion; IBA:GO_Central.
DR GO; GO:0000175; F:3'-5'-RNA exonuclease activity; IBA:GO_Central.
DR GO; GO:0004654; F:polyribonucleotide nucleotidyltransferase activity; IBA:GO_Central.
DR GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR GO; GO:0000958; P:mitochondrial mRNA catabolic process; IBA:GO_Central.
DR GO; GO:0000965; P:mitochondrial RNA 3'-end processing; IBA:GO_Central.
DR Gene3D; 3.30.230.70; GHMP Kinase, N-terminal domain; 2.
DR InterPro; IPR001247; ExoRNase_PH_dom1.
DR InterPro; IPR015847; ExoRNase_PH_dom2.
DR InterPro; IPR036345; ExoRNase_PH_dom2_sf.
DR InterPro; IPR012162; PNPase.
DR InterPro; IPR027408; PNPase/RNase_PH_dom_sf.
DR InterPro; IPR020568; Ribosomal_Su5_D2-typ_SF.
DR PANTHER; PTHR11252; POLYRIBONUCLEOTIDE NUCLEOTIDYLTRANSFERASE; 1.
DR PANTHER; PTHR11252:SF14; POLYRIBONUCLEOTIDE NUCLEOTIDYLTRANSFERASE; 1.
DR Pfam; PF01138; RNase_PH; 2.
DR Pfam; PF03725; RNase_PH_C; 2.
DR SUPFAM; SSF55666; Ribonuclease PH domain 2-like; 2.
DR SUPFAM; SSF54211; Ribosomal protein S5 domain 2-like; 2.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000028999}.
FT DOMAIN 83..194
FT /note="Exoribonuclease phosphorolytic"
FT /evidence="ECO:0000259|Pfam:PF01138"
FT DOMAIN 198..253
FT /note="Exoribonuclease phosphorolytic"
FT /evidence="ECO:0000259|Pfam:PF03725"
FT DOMAIN 329..459
FT /note="Exoribonuclease phosphorolytic"
FT /evidence="ECO:0000259|Pfam:PF01138"
FT DOMAIN 464..538
FT /note="Exoribonuclease phosphorolytic"
FT /evidence="ECO:0000259|Pfam:PF03725"
FT REGION 277..304
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 289..304
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 568 AA; 63130 MW; 03D985B95EB40809 CRC64;
MAFSFLRSCV KSIGVSRQLI VLESKVTCLE PHAPGPLTIA SKIRAFSSFT RRTRTRSNAL
NPPVIEAFQL GSSIISLEMI DDEKNHGSVL CHMDGTTVRS KIIMSHDKYN DDNFLQVYYD
ETRYGERWRS HDPTDREIMC SHIIDRSIRP LFTAGFPANV MVNVCVLKTN WKHEADAELM
AIIATSAALM KLNITQAGPI GVIRIGRINE NIIINPTIDE QRRSDINLLY VCTRQNPIMA
DLVASEISES DLTANLKLAQ LEAVKCIDSQ VKLRERYQMD KKDTSNSKNF QDTRTQSSNH
SGREVALGQA HCTETISDVN RFDGRSIHQI RPLHCEAGYL HTLHGSSLMS CGETQVLCTA
SIGKPGETQS VDVLPRKSFR VDYDFPPFCT NHIVDIFSRR WLEIGDGMFT EKALLAVIPS
QRDFPYAIHL NSEVLASDGS SSTTSVCGGS IALMDAGVPI KSHVAGVSIG LVTDMETSNG
QLENYRIITD TSGLENDLGE MDFKIAGTRN GITAIQLDAK STLLSLDVIG EALKYGRQAH
LQILDHMEQA INSPKETSYY KERRIEDV
//
