ID A0A078J3Y9_BRANA Unreviewed; 296 AA.
AC A0A078J3Y9;
DT 29-OCT-2014, integrated into UniProtKB/TrEMBL.
DT 29-OCT-2014, sequence version 1.
DT 27-MAR-2024, entry version 30.
DE SubName: Full=(rape) hypothetical protein {ECO:0000313|EMBL:CAF2108530.1};
DE SubName: Full=BnaCnng33450D protein {ECO:0000313|EMBL:CDY58618.1};
GN Name=BnaCnng33450D {ECO:0000313|EMBL:CDY58618.1};
GN ORFNames=DARMORV10_C08P15440.1 {ECO:0000313|EMBL:CAF2108530.1},
GN GSBRNA2T00024900001 {ECO:0000313|EMBL:CDY58618.1};
OS Brassica napus (Rape).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica.
OX NCBI_TaxID=3708 {ECO:0000313|EMBL:CDY58618.1, ECO:0000313|Proteomes:UP000028999};
RN [1] {ECO:0000313|EMBL:CDY58618.1, ECO:0000313|Proteomes:UP000028999}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Darmor-bzh {ECO:0000313|Proteomes:UP000028999};
RX PubMed=25146293; DOI=10.1126/science.1253435;
RA Chalhoub B., Denoeud F., Liu S., Parkin I.A., Tang H., Wang X., Chiquet J.,
RA Belcram H., Tong C., Samans B., Correa M., Da Silva C., Just J.,
RA Falentin C., Koh C.S., Le Clainche I., Bernard M., Bento P., Noel B.,
RA Labadie K., Alberti A., Charles M., Arnaud D., Guo H., Daviaud C.,
RA Alamery S., Jabbari K., Zhao M., Edger P.P., Chelaifa H., Tack D.,
RA Lassalle G., Mestiri I., Schnel N., Le Paslier M.C., Fan G., Renault V.,
RA Bayer P.E., Golicz A.A., Manoli S., Lee T.H., Thi V.H., Chalabi S., Hu Q.,
RA Fan C., Tollenaere R., Lu Y., Battail C., Shen J., Sidebottom C.H.,
RA Wang X., Canaguier A., Chauveau A., Berard A., Deniot G., Guan M., Liu Z.,
RA Sun F., Lim Y.P., Lyons E., Town C.D., Bancroft I., Wang X., Meng J.,
RA Ma J., Pires J.C., King G.J., Brunel D., Delourme R., Renard M., Aury J.M.,
RA Adams K.L., Batley J., Snowdon R.J., Tost J., Edwards D., Zhou Y., Hua W.,
RA Sharpe A.G., Paterson A.H., Guan C., Wincker P.;
RT "Plant genetics. Early allopolyploid evolution in the post-Neolithic
RT Brassica napus oilseed genome.";
RL Science 345:950-953(2014).
RN [2] {ECO:0000313|EMBL:CDY58618.1}
RP NUCLEOTIDE SEQUENCE.
RA Genoscope - CEA;
RL Submitted (JUN-2014) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EMBL:CAF2108530.1}
RP NUCLEOTIDE SEQUENCE.
RG Genoscope - CEA;
RA William W.;
RL Submitted (JAN-2021) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; HG994372; CAF2108530.1; -; Genomic_DNA.
DR EMBL; LK033683; CDY58618.1; -; Genomic_DNA.
DR STRING; 3708.A0A078J3Y9; -.
DR PaxDb; 3708-A0A078J3Y9; -.
DR EnsemblPlants; CDY58618; CDY58618; GSBRNA2T00024900001.
DR Gramene; CDY58618; CDY58618; GSBRNA2T00024900001.
DR OMA; NCMGASS; -.
DR OrthoDB; 1100975at2759; -.
DR Proteomes; UP000028999; Unassembled WGS sequence.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR InterPro; IPR032816; VTT_dom.
DR PANTHER; PTHR46431:SF16; (RAPE) HYPOTHETICAL PROTEIN; 1.
DR PANTHER; PTHR46431; EXPRESSED PROTEIN; 1.
DR Pfam; PF09335; SNARE_assoc; 1.
PE 4: Predicted;
KW Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000028999};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 52..76
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 96..116
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 136..158
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 217..237
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 257..278
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 117..237
FT /note="VTT"
FT /evidence="ECO:0000259|Pfam:PF09335"
FT REGION 29..48
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 296 AA; 32473 MW; 27A51A8BBFB6AD36 CRC64;
MTYSDGVDKT VPELKLRMED SEKGDYVKLR GGSDEEEQGS QAESSGCSSG SVWFWVKLIA
LVACVGVLAF VIIKWVAPFL IEKELIPFIN WVRSTFSIPV LGLLLFASVA LFPTILLPSS
PSMWMAGLTF GYGKGFLLIL AAASIGVTLP FLIGHLFLYK MQEWLKQYPK KAAILRAAGE
GTWFHQFQAV ALIRVSPFPY MIYNYCALAT GVHYGPYILG SLVGMVPEIF VSIYTGIMLR
TLAVASDKRH TLSAVEIVVN VLGFCVTASA TIVCTIYAKK KLSSMQSDEV ETLPNV
//
