ID A0A086ZJZ2_9BIFI Unreviewed; 201 AA.
AC A0A086ZJZ2;
DT 29-OCT-2014, integrated into UniProtKB/TrEMBL.
DT 29-OCT-2014, sequence version 1.
DT 24-JAN-2024, entry version 30.
DE SubName: Full=CarD-like transcriptional regulator {ECO:0000313|EMBL:KFI46842.1};
GN ORFNames=BBOH_0316 {ECO:0000313|EMBL:KFI46842.1};
OS Bifidobacterium bohemicum DSM 22767.
OC Bacteria; Actinomycetota; Actinomycetes; Bifidobacteriales;
OC Bifidobacteriaceae; Bifidobacterium.
OX NCBI_TaxID=1437606 {ECO:0000313|EMBL:KFI46842.1, ECO:0000313|Proteomes:UP000029096};
RN [1] {ECO:0000313|EMBL:KFI46842.1, ECO:0000313|Proteomes:UP000029096}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 22767 {ECO:0000313|EMBL:KFI46842.1,
RC ECO:0000313|Proteomes:UP000029096};
RA Ventura M., Milani C., Lugli G.A.;
RT "Genomics of Bifidobacteria.";
RL Submitted (MAR-2014) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KFI46842.1}.
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DR EMBL; JGYP01000001; KFI46842.1; -; Genomic_DNA.
DR RefSeq; WP_033520376.1; NZ_JGYP01000001.1.
DR AlphaFoldDB; A0A086ZJZ2; -.
DR STRING; 1437606.BBOH_0316; -.
DR eggNOG; COG1329; Bacteria.
DR OrthoDB; 9786074at2; -.
DR Proteomes; UP000029096; Unassembled WGS sequence.
DR Gene3D; 2.40.10.170; -; 1.
DR Gene3D; 1.20.58.1290; CarD-like, C-terminal domain; 1.
DR InterPro; IPR003711; CarD-like/TRCF_RID.
DR InterPro; IPR036101; CarD-like/TRCF_RID_sf.
DR InterPro; IPR042215; CarD-like_C.
DR InterPro; IPR048792; CarD_C.
DR PANTHER; PTHR38447:SF1; RNA POLYMERASE-BINDING TRANSCRIPTION FACTOR CARD; 1.
DR PANTHER; PTHR38447; TRANSCRIPTION FACTOR YDEB-RELATED; 1.
DR Pfam; PF21095; CarD_C; 1.
DR Pfam; PF02559; CarD_TRCF_RID; 1.
DR SMART; SM01058; CarD_TRCF; 1.
DR SUPFAM; SSF141259; CarD-like; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000029096}.
FT DOMAIN 2..114
FT /note="CarD-like/TRCF RNAP-interacting"
FT /evidence="ECO:0000259|SMART:SM01058"
FT REGION 164..183
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 167..183
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 201 AA; 22487 MW; 0B47C703A7177B9F CRC64;
MDYKVGDVVV YPRHGAAKVV ALSQRTVKGV TRDYLQLSVL SSDGLVIDVP VENAKKVGIR
NIVDGNEVEK VFEIIRTPIV DSEKMNWSRR YKLNVEKIAT GDVNKIAEVV RDLSQRDVDE
HGLSAGEKRM LTRSRSILTS EIALSENIDE DEVQRLLDVN LGYADPRPDD ALHHTKAPEE
AADKTLARLE AQSKEAKKKK K
//
