ID A0A087G898_ARAAL Unreviewed; 1068 AA.
AC A0A087G898;
DT 29-OCT-2014, integrated into UniProtKB/TrEMBL.
DT 29-OCT-2014, sequence version 1.
DT 27-MAR-2024, entry version 51.
DE SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KFK26100.1};
GN OrderedLocusNames=AALP_Aa8g202800 {ECO:0000313|EMBL:KFK26100.1};
OS Arabis alpina (Alpine rock-cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Arabideae; Arabis.
OX NCBI_TaxID=50452 {ECO:0000313|EMBL:KFK26100.1, ECO:0000313|Proteomes:UP000029120};
RN [1] {ECO:0000313|Proteomes:UP000029120}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Pajares {ECO:0000313|Proteomes:UP000029120};
RX PubMed=27246759; DOI=10.1038/nplants.2014.23;
RA Willing E.M., Rawat V., Mandakova T., Maumus F., James G.V.,
RA Nordstroem K.J., Becker C., Warthmann N., Chica C., Szarzynska B.,
RA Zytnicki M., Albani M.C., Kiefer C., Bergonzi S., Castaings L.,
RA Mateos J.L., Berns M.C., Bujdoso N., Piofczyk T., de Lorenzo L.,
RA Barrero-Sicilia C., Mateos I., Piednoel M., Hagmann J., Chen-Min-Tao R.,
RA Iglesias-Fernandez R., Schuster S.C., Alonso-Blanco C., Roudier F.,
RA Carbonero P., Paz-Ares J., Davis S.J., Pecinka A., Quesneville H.,
RA Colot V., Lysak M.A., Weigel D., Coupland G., Schneeberger K.;
RT "Genome expansion of Arabis alpina linked with retrotransposition and
RT reduced symmetric DNA methylation.";
RL Nat. Plants 1:14023-14023(2015).
CC -!- SIMILARITY: Belongs to the SNF2/RAD54 helicase family. ISWI subfamily.
CC {ECO:0000256|ARBA:ARBA00009687}.
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DR EMBL; CM002876; KFK26100.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A087G898; -.
DR EnsemblPlants; KFK26100; KFK26100; AALP_AA8G202800.
DR Gramene; KFK26100; KFK26100; AALP_AA8G202800.
DR eggNOG; KOG0385; Eukaryota.
DR OMA; EFQFRES; -.
DR OrthoDB; 5482994at2759; -.
DR Proteomes; UP000029120; Chromosome 8.
DR GO; GO:0031010; C:ISWI-type complex; IEA:EnsemblPlants.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0140658; F:ATP-dependent chromatin remodeler activity; IEA:InterPro.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0016787; F:hydrolase activity; IEA:UniProtKB-KW.
DR GO; GO:0031491; F:nucleosome binding; IEA:InterPro.
DR GO; GO:0010228; P:vegetative to reproductive phase transition of meristem; IEA:EnsemblPlants.
DR CDD; cd17997; DEXHc_SMARCA1_SMARCA5; 1.
DR CDD; cd00167; SANT; 1.
DR CDD; cd18793; SF2_C_SNF; 1.
DR Gene3D; 1.10.10.60; Homeodomain-like; 2.
DR Gene3D; 1.20.5.1190; iswi atpase; 1.
DR Gene3D; 1.10.1040.30; ISWI, HAND domain; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR Gene3D; 3.40.50.10810; Tandem AAA-ATPase domain; 1.
DR InterPro; IPR014001; Helicase_ATP-bd.
DR InterPro; IPR001650; Helicase_C.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR044754; Isw1/2_DEXHc.
DR InterPro; IPR015194; ISWI_HAND-dom.
DR InterPro; IPR036306; ISWI_HAND-dom_sf.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR001005; SANT/Myb.
DR InterPro; IPR017884; SANT_dom.
DR InterPro; IPR015195; SLIDE.
DR InterPro; IPR038718; SNF2-like_sf.
DR InterPro; IPR049730; SNF2/RAD54-like_C.
DR InterPro; IPR000330; SNF2_N.
DR PANTHER; PTHR45623; CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 3-RELATED-RELATED; 1.
DR PANTHER; PTHR45623:SF49; SWI_SNF RELATED, MATRIX ASSOCIATED, ACTIN DEPENDENT REGULATOR OF CHROMATIN, SUBFAMILY A, MEMBER 1; 1.
DR Pfam; PF09110; HAND; 1.
DR Pfam; PF00271; Helicase_C; 1.
DR Pfam; PF09111; SLIDE; 1.
DR Pfam; PF00176; SNF2-rel_dom; 1.
DR SMART; SM00487; DEXDc; 1.
DR SMART; SM00490; HELICc; 1.
DR SMART; SM00717; SANT; 2.
DR SUPFAM; SSF101224; HAND domain of the nucleosome remodeling ATPase ISWI; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 2.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 2.
DR PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR PROSITE; PS51194; HELICASE_CTER; 1.
DR PROSITE; PS51293; SANT; 1.
PE 3: Inferred from homology;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Reference proteome {ECO:0000313|Proteomes:UP000029120}.
FT DOMAIN 203..368
FT /note="Helicase ATP-binding"
FT /evidence="ECO:0000259|PROSITE:PS51192"
FT DOMAIN 496..647
FT /note="Helicase C-terminal"
FT /evidence="ECO:0000259|PROSITE:PS51194"
FT DOMAIN 842..894
FT /note="SANT"
FT /evidence="ECO:0000259|PROSITE:PS51293"
FT REGION 1..98
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 133..176
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1014..1068
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 11..34
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 46..75
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1014..1031
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1034..1050
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1051..1068
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1068 AA; 123796 MW; A8496BCF47CDAB2F CRC64;
MAKQEVSSDE AYSSEEEPQA NDQVNVEEDD EELEAVARSA NSDEEDVAPD EAPVSDDEVV
PVEDDADEDE EDEERAEISK REKARLKEMQ KKKKQKIQEI LDSQNASIDA DMNNKGKGRL
KYLLQQTELF SHFAKADPSP SQKKGKGRGR HASKLTEEEE DEECLKEEEG GVAGSGGTRL
LTQPACIQGK LRDYQLAGLN WLIRLYENGI NGILADEMGL GKTLQTISLL AYLHEYRGIN
GPHMVVAPKS TLGNWMNEIR RFCPVLRAVK FLGNPEERRY IREELLVAGK FDICVTSFEM
AIKEKTTLRR FSWRYIIIDE AHRIKNENSL LSKTMRLFNT NYRLLITGTP LQNNLHELWA
LLNFLLPEVF SSAETFDEWF QISGENDQQE VVQQLHKVLR PFLLRRLKSD VEKGLPPKKE
TILKIGLSQM QKQYYKALLQ KDLEVVNGGG ERKRLLNIAM QLRKCCNHPY LFQGAEPGPP
YTTGDHLVTN AGKMVLLDKL LPKLKERDSR VLIFSQMTRL LDILEDYLMY RGYQYCRIDG
NTGGDERDAS IEAYNKPGSE KFVFLLSTRA GGLGINLATA DVVILYDSDW NPQVDLQAQD
RAHRIGQKKE VQVFRFCTEN AIEEKVIERA YKKLALDALV IQQGRLAEQK TVNKDELLQM
VRYGAEMVFS SKDSTITDED IDRIIAKGEE AKAELDAKMK KFTEDAIQFK MDDGADLYNF
DDDDKDENKF DFKKIVSENW NDPPKRERKR NYSETEYFKQ TLRQGAPAKP KEPRIPRMPQ
LHDFQFFNIQ RLTELYEKEV RHLMQTHQKT QMKDTIEIDE AEEVGDPLTA EEVEEKEGLL
EEGFSTWSRR DFNAFIRACE KYGRNDIKCI ASEMEGKTEE EVERYAQVFK DRYKELNDYD
RVIKNIERGE ARITRKDEIM KAIGKKLDRY RNPWLELKIQ YGQNKGKLYN EECDRFMICM
VHKLGYGNWD ELKAEFRTSS LFKFDWFVKS RTSQEFARRC DTLIRLIEKE NQECDERERQ
ARKEKKLAKS ATPSKRASGR QANESPPTFK KRKQLSMDDF VSSGKRKK
//
