ID   A0A087GJZ0_ARAAL        Unreviewed;       264 AA.
AC   A0A087GJZ0;
DT   29-OCT-2014, integrated into UniProtKB/TrEMBL.
DT   29-OCT-2014, sequence version 1.
DT   24-JAN-2024, entry version 36.
DE   RecName: Full=Homeobox domain-containing protein {ECO:0000259|PROSITE:PS50071};
GN   OrderedLocusNames=AALP_Aa7g230000 {ECO:0000313|EMBL:KFK30192.1};
OS   Arabis alpina (Alpine rock-cress).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; malvids; Brassicales; Brassicaceae; Arabideae; Arabis.
OX   NCBI_TaxID=50452 {ECO:0000313|EMBL:KFK30192.1, ECO:0000313|Proteomes:UP000029120};
RN   [1] {ECO:0000313|Proteomes:UP000029120}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Pajares {ECO:0000313|Proteomes:UP000029120};
RX   PubMed=27246759; DOI=10.1038/nplants.2014.23;
RA   Willing E.M., Rawat V., Mandakova T., Maumus F., James G.V.,
RA   Nordstroem K.J., Becker C., Warthmann N., Chica C., Szarzynska B.,
RA   Zytnicki M., Albani M.C., Kiefer C., Bergonzi S., Castaings L.,
RA   Mateos J.L., Berns M.C., Bujdoso N., Piofczyk T., de Lorenzo L.,
RA   Barrero-Sicilia C., Mateos I., Piednoel M., Hagmann J., Chen-Min-Tao R.,
RA   Iglesias-Fernandez R., Schuster S.C., Alonso-Blanco C., Roudier F.,
RA   Carbonero P., Paz-Ares J., Davis S.J., Pecinka A., Quesneville H.,
RA   Colot V., Lysak M.A., Weigel D., Coupland G., Schneeberger K.;
RT   "Genome expansion of Arabis alpina linked with retrotransposition and
RT   reduced symmetric DNA methylation.";
RL   Nat. Plants 1:14023-14023(2015).
CC   -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123,
CC       ECO:0000256|PROSITE-ProRule:PRU00108, ECO:0000256|RuleBase:RU000682}.
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DR   EMBL; CM002875; KFK30192.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A087GJZ0; -.
DR   EnsemblPlants; KFK30192; KFK30192; AALP_AA7G230000.
DR   Gramene; KFK30192; KFK30192; AALP_AA7G230000.
DR   eggNOG; ENOG502QVBF; Eukaryota.
DR   OMA; VMTDEQY; -.
DR   OrthoDB; 454865at2759; -.
DR   Proteomes; UP000029120; Chromosome 7.
DR   GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR   GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:EnsemblPlants.
DR   GO; GO:0000976; F:transcription cis-regulatory region binding; IEA:EnsemblPlants.
DR   GO; GO:1990110; P:callus formation; IEA:EnsemblPlants.
DR   GO; GO:0010047; P:fruit dehiscence; IEA:EnsemblPlants.
DR   GO; GO:1990058; P:fruit replum development; IEA:EnsemblPlants.
DR   CDD; cd00086; homeodomain; 1.
DR   Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR   InterPro; IPR009057; Homeobox-like_sf.
DR   InterPro; IPR001356; Homeobox_dom.
DR   InterPro; IPR044559; WOX13-like.
DR   PANTHER; PTHR46777; WUSCHEL-RELATED HOMEOBOX 13; 1.
DR   PANTHER; PTHR46777:SF5; WUSCHEL-RELATED HOMEOBOX 13; 1.
DR   Pfam; PF00046; Homeodomain; 1.
DR   SMART; SM00389; HOX; 1.
DR   SUPFAM; SSF46689; Homeodomain-like; 1.
DR   PROSITE; PS50071; HOMEOBOX_2; 1.
PE   4: Predicted;
KW   DNA-binding {ECO:0000256|PROSITE-ProRule:PRU00108,
KW   ECO:0000256|RuleBase:RU000682};
KW   Homeobox {ECO:0000256|PROSITE-ProRule:PRU00108,
KW   ECO:0000256|RuleBase:RU000682};
KW   Nucleus {ECO:0000256|PROSITE-ProRule:PRU00108,
KW   ECO:0000256|RuleBase:RU000682};
KW   Reference proteome {ECO:0000313|Proteomes:UP000029120}.
FT   DOMAIN          87..152
FT                   /note="Homeobox"
FT                   /evidence="ECO:0000259|PROSITE:PS50071"
FT   DNA_BIND        89..153
FT                   /note="Homeobox"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00108"
FT   REGION          149..215
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        158..173
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        175..189
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        192..214
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   264 AA;  29428 MW;  43A357B48514E194 CRC64;
     MMEWDNQQQP NNNSNLHVID VNGGGGMYVK VMTDEQYETL RKQIAIYATI CERLVEMHKT
     LTAQQDLAGG RLGGLYADPL MSSIGNKMSA RQRWTPTPVQ LQILERIFDQ GTGTPSKQKI
     KDITEELTQH GQIAEQNVYN WFQNRRARSK RKQHCGGGGG GSSSNNNGES EVETEIESLN
     DKRKRQPESL LVLPDGNNNN NAIGTSSTSP RPEDLCFQSP EMSSDLHLLG VLSNPRDDEH
     LVGKMGLSDS YNLYDHVEDY GMSG
//