ID A0A087GQV3_ARAAL Unreviewed; 453 AA.
AC A0A087GQV3;
DT 29-OCT-2014, integrated into UniProtKB/TrEMBL.
DT 29-OCT-2014, sequence version 1.
DT 27-MAR-2024, entry version 42.
DE RecName: Full=RING-type domain-containing protein {ECO:0000259|PROSITE:PS50089};
GN OrderedLocusNames=AALP_Aa6g218500 {ECO:0000313|EMBL:KFK32255.1};
OS Arabis alpina (Alpine rock-cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Arabideae; Arabis.
OX NCBI_TaxID=50452 {ECO:0000313|EMBL:KFK32255.1, ECO:0000313|Proteomes:UP000029120};
RN [1] {ECO:0000313|Proteomes:UP000029120}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Pajares {ECO:0000313|Proteomes:UP000029120};
RX PubMed=27246759; DOI=10.1038/nplants.2014.23;
RA Willing E.M., Rawat V., Mandakova T., Maumus F., James G.V.,
RA Nordstroem K.J., Becker C., Warthmann N., Chica C., Szarzynska B.,
RA Zytnicki M., Albani M.C., Kiefer C., Bergonzi S., Castaings L.,
RA Mateos J.L., Berns M.C., Bujdoso N., Piofczyk T., de Lorenzo L.,
RA Barrero-Sicilia C., Mateos I., Piednoel M., Hagmann J., Chen-Min-Tao R.,
RA Iglesias-Fernandez R., Schuster S.C., Alonso-Blanco C., Roudier F.,
RA Carbonero P., Paz-Ares J., Davis S.J., Pecinka A., Quesneville H.,
RA Colot V., Lysak M.A., Weigel D., Coupland G., Schneeberger K.;
RT "Genome expansion of Arabis alpina linked with retrotransposition and
RT reduced symmetric DNA methylation.";
RL Nat. Plants 1:14023-14023(2015).
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DR EMBL; CM002874; KFK32255.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A087GQV3; -.
DR EnsemblPlants; KFK32255; KFK32255; AALP_AA6G218500.
DR Gramene; KFK32255; KFK32255; AALP_AA6G218500.
DR eggNOG; KOG4177; Eukaryota.
DR OMA; AYYGHFE; -.
DR OrthoDB; 6251at2759; -.
DR Proteomes; UP000029120; Chromosome 6.
DR GO; GO:0016740; F:transferase activity; IEA:UniProtKB-KW.
DR GO; GO:0009408; P:response to heat; IEA:EnsemblPlants.
DR CDD; cd23144; RING-HC_XBAT31-like; 1.
DR Gene3D; 1.25.40.20; Ankyrin repeat-containing domain; 3.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 1.
DR InterPro; IPR002110; Ankyrin_rpt.
DR InterPro; IPR036770; Ankyrin_rpt-contain_sf.
DR InterPro; IPR001841; Znf_RING.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR PANTHER; PTHR24128:SF14; E3 UBIQUITIN-PROTEIN LIGASE XBAT31-RELATED; 1.
DR PANTHER; PTHR24128; HOMEOBOX PROTEIN WARIAI; 1.
DR Pfam; PF00023; Ank; 1.
DR Pfam; PF12796; Ank_2; 2.
DR SMART; SM00248; ANK; 5.
DR SUPFAM; SSF48403; Ankyrin repeat; 1.
DR SUPFAM; SSF57850; RING/U-box; 1.
DR PROSITE; PS50297; ANK_REP_REGION; 4.
DR PROSITE; PS50088; ANK_REPEAT; 4.
DR PROSITE; PS50089; ZF_RING_2; 1.
PE 4: Predicted;
KW ANK repeat {ECO:0000256|ARBA:ARBA00023043, ECO:0000256|PROSITE-
KW ProRule:PRU00023}; Metal-binding {ECO:0000256|PROSITE-ProRule:PRU00175};
KW Reference proteome {ECO:0000313|Proteomes:UP000029120};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Transferase {ECO:0000256|ARBA:ARBA00022679};
KW Ubl conjugation pathway {ECO:0000256|ARBA:ARBA00022786};
KW Zinc {ECO:0000256|PROSITE-ProRule:PRU00175};
KW Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00175}.
FT REPEAT 45..77
FT /note="ANK"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00023"
FT REPEAT 78..110
FT /note="ANK"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00023"
FT REPEAT 157..189
FT /note="ANK"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00023"
FT REPEAT 194..226
FT /note="ANK"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00023"
FT DOMAIN 319..368
FT /note="RING-type"
FT /evidence="ECO:0000259|PROSITE:PS50089"
FT REGION 378..409
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 387..409
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 453 AA; 49227 MW; DBEDA9AC8979E976 CRC64;
MGQSMSCGAR PEHGIFASVQ CGDIVTIRRL MVTDPSLLLQ TTAYDRHSVL HVAAASGQIE
ILSLLLERFT NPDMLNRHKQ TPLMLAAMYG RISCVKKLAE VGANILMFDS VNRRTCLHYA
AYYGHADCVQ AILSAAQSSP VAVHWGYARF VNIRDDKGAT PLHLAARQRR PECVNVLLDS
GSLVCASTSV YGSPGSTPLH LAARSGSIDC VRKLLAWGAD RLQRDASGRI PYVVAIKHKH
GACGALLNPS SAEPLVWPSP LKFISELNDE AKLLLEQALM DANREREKTI LKGTAYSLPS
FSDTASDDNM SEVSDTELCC ICFEQVCTIE VKDCGHQMCA QCTLALCCHN KPNPTTSTVT
PPVCPFCRST IARLVVAQNN NNNDKSKSQD DVVDREAGDV SSSKFRKHRR SINLGEESSS
FMGLSSIGSF GRITGRGSGR IAADNQLMDK PIL
//
