ID A0A087GT31_ARAAL Unreviewed; 373 AA.
AC A0A087GT31;
DT 29-OCT-2014, integrated into UniProtKB/TrEMBL.
DT 29-OCT-2014, sequence version 1.
DT 24-JAN-2024, entry version 26.
DE RecName: Full=glycerophosphodiester phosphodiesterase {ECO:0000256|ARBA:ARBA00012247};
DE EC=3.1.4.46 {ECO:0000256|ARBA:ARBA00012247};
GN OrderedLocusNames=AALP_Aa6g322000 {ECO:0000313|EMBL:KFK33033.1};
OS Arabis alpina (Alpine rock-cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Arabideae; Arabis.
OX NCBI_TaxID=50452 {ECO:0000313|EMBL:KFK33033.1, ECO:0000313|Proteomes:UP000029120};
RN [1] {ECO:0000313|Proteomes:UP000029120}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Pajares {ECO:0000313|Proteomes:UP000029120};
RX PubMed=27246759; DOI=10.1038/nplants.2014.23;
RA Willing E.M., Rawat V., Mandakova T., Maumus F., James G.V.,
RA Nordstroem K.J., Becker C., Warthmann N., Chica C., Szarzynska B.,
RA Zytnicki M., Albani M.C., Kiefer C., Bergonzi S., Castaings L.,
RA Mateos J.L., Berns M.C., Bujdoso N., Piofczyk T., de Lorenzo L.,
RA Barrero-Sicilia C., Mateos I., Piednoel M., Hagmann J., Chen-Min-Tao R.,
RA Iglesias-Fernandez R., Schuster S.C., Alonso-Blanco C., Roudier F.,
RA Carbonero P., Paz-Ares J., Davis S.J., Pecinka A., Quesneville H.,
RA Colot V., Lysak M.A., Weigel D., Coupland G., Schneeberger K.;
RT "Genome expansion of Arabis alpina linked with retrotransposition and
RT reduced symmetric DNA methylation.";
RL Nat. Plants 1:14023-14023(2015).
CC -!- CATALYTIC ACTIVITY:
CC Reaction=a sn-glycero-3-phosphodiester + H2O = an alcohol + H(+) + sn-
CC glycerol 3-phosphate; Xref=Rhea:RHEA:12969, ChEBI:CHEBI:15377,
CC ChEBI:CHEBI:15378, ChEBI:CHEBI:30879, ChEBI:CHEBI:57597,
CC ChEBI:CHEBI:83408; EC=3.1.4.46;
CC Evidence={ECO:0000256|ARBA:ARBA00029315};
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DR EMBL; CM002874; KFK33033.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A087GT31; -.
DR EnsemblPlants; KFK33033; KFK33033; AALP_AA6G322000.
DR Gramene; KFK33033; KFK33033; AALP_AA6G322000.
DR eggNOG; KOG2421; Eukaryota.
DR OMA; HANERPI; -.
DR OrthoDB; 1005457at2759; -.
DR Proteomes; UP000029120; Chromosome 6.
DR GO; GO:0008889; F:glycerophosphodiester phosphodiesterase activity; IEA:UniProtKB-EC.
DR GO; GO:0006071; P:glycerol metabolic process; IEA:UniProtKB-KW.
DR GO; GO:0006629; P:lipid metabolic process; IEA:InterPro.
DR CDD; cd08605; GDPD_GDE5_like_1_plant; 1.
DR Gene3D; 3.20.20.190; Phosphatidylinositol (PI) phosphodiesterase; 1.
DR InterPro; IPR030395; GP_PDE_dom.
DR InterPro; IPR017946; PLC-like_Pdiesterase_TIM-brl.
DR PANTHER; PTHR22958:SF29; GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE GDPD2; 1.
DR PANTHER; PTHR22958; GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE; 1.
DR Pfam; PF03009; GDPD; 1.
DR SUPFAM; SSF51695; PLC-like phosphodiesterases; 1.
DR PROSITE; PS51704; GP_PDE; 1.
PE 4: Predicted;
KW Glycerol metabolism {ECO:0000256|ARBA:ARBA00022798};
KW Reference proteome {ECO:0000313|Proteomes:UP000029120}.
FT DOMAIN 39..327
FT /note="GP-PDE"
FT /evidence="ECO:0000259|PROSITE:PS51704"
SQ SEQUENCE 373 AA; 42145 MW; 0F7899F7F5195085 CRC64;
MALRTILVSD VPSLPESVYG LSDQGLDLSK SKPFRLPGFS VIGHRGNGMN VLQSSDRRTR
GFKENSILSF NSAAKFPIDF IEFDVQVTKD DYPVIFHDDF IYSEENGIVN ESRVTDLSLS
EFLLYGPQRE AEKIGKTLMR KSKDGNVLKW DVDLDDCLCT LQEAFERVEQ SLGFNIELKF
DDHTVYEREF LVNVLRSVLQ VVFDYGKDRP VIFSTFQPDA AKLVRELQSA YPVYFLTDAG
NTIYNDDRRN SLEEAIKVCL EGKLQGIVSE VKGVFRNPSA ISKIKESNLS LLTYGKLNNV
GEAVYMQYVM GIEGVIVDYV EEITESVTVM MIRPSSSPLP SPPSNDDVAI TRPEFSQKEI
DFLLKLLSQL IQH
//
