ID A0A087H672_ARAAL Unreviewed; 588 AA.
AC A0A087H672;
DT 29-OCT-2014, integrated into UniProtKB/TrEMBL.
DT 29-OCT-2014, sequence version 1.
DT 27-MAR-2024, entry version 32.
DE RecName: Full=Pentatricopeptide repeat-containing protein {ECO:0008006|Google:ProtNLM};
GN OrderedLocusNames=AALP_Aa3g007300 {ECO:0000313|EMBL:KFK37624.1};
OS Arabis alpina (Alpine rock-cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Arabideae; Arabis.
OX NCBI_TaxID=50452 {ECO:0000313|EMBL:KFK37624.1, ECO:0000313|Proteomes:UP000029120};
RN [1] {ECO:0000313|Proteomes:UP000029120}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Pajares {ECO:0000313|Proteomes:UP000029120};
RX PubMed=27246759; DOI=10.1038/nplants.2014.23;
RA Willing E.M., Rawat V., Mandakova T., Maumus F., James G.V.,
RA Nordstroem K.J., Becker C., Warthmann N., Chica C., Szarzynska B.,
RA Zytnicki M., Albani M.C., Kiefer C., Bergonzi S., Castaings L.,
RA Mateos J.L., Berns M.C., Bujdoso N., Piofczyk T., de Lorenzo L.,
RA Barrero-Sicilia C., Mateos I., Piednoel M., Hagmann J., Chen-Min-Tao R.,
RA Iglesias-Fernandez R., Schuster S.C., Alonso-Blanco C., Roudier F.,
RA Carbonero P., Paz-Ares J., Davis S.J., Pecinka A., Quesneville H.,
RA Colot V., Lysak M.A., Weigel D., Coupland G., Schneeberger K.;
RT "Genome expansion of Arabis alpina linked with retrotransposition and
RT reduced symmetric DNA methylation.";
RL Nat. Plants 1:14023-14023(2015).
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DR EMBL; CM002871; KFK37624.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A087H672; -.
DR EnsemblPlants; KFK37624; KFK37624; AALP_AA3G007300.
DR Gramene; KFK37624; KFK37624; AALP_AA3G007300.
DR OMA; QWKKTWV; -.
DR Proteomes; UP000029120; Chromosome 3.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 5.
DR InterPro; IPR046848; E_motif.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 6.
DR PANTHER; PTHR47928:SF92; PPR_LONG DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR47928; REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED; 1.
DR Pfam; PF20431; E_motif; 1.
DR Pfam; PF01535; PPR; 2.
DR Pfam; PF12854; PPR_1; 1.
DR Pfam; PF13041; PPR_2; 2.
DR PROSITE; PS51375; PPR; 6.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000029120};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT REPEAT 5..39
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 76..110
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 178..208
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 209..243
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 363..398
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 399..434
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
SQ SEQUENCE 588 AA; 66071 MW; CC5774F00927B101 CRC64;
MTKRSLYQWN TLLKSLSRDK QWEQVLCHFT QMFRDEEKPD SFTLPVALKA CVELREVKYG
EMIHGFVKKD AMVGSDLYVG SALIDMYAKC GRMTEALRVF DELEKPDIVT WSSMVSGFDK
NGLPFEAVEF LRRMVMSSDV SPDRVTLITL VSACTKLSNS RLGKCVHGFV MRKGFEKDLS
LLNSLLNCYA KSRAFKEAVN LFKMMEEKDV ISWSTVIACY VQNGAANEAL RVFNEMMGNG
IEPNVATMLS VIQACAAAHD LEQGRKAHEL VIRKGLETEV KVSTALVDMY MKCFSPEEAY
AVFSRMQKKD VVSWVALISG FTLNGMAQRS TEEFSKMLLG ELYSRCGSLG NASKVFNEIT
LKDTVVWTSL ITGYGIHGKG TKALEIFNNM VKSSKVEPNE VTFLSILSAC SHSGLIQEGL
RIFNLMVSDY GLVPNLEHYT VLVDLLGRVG ELDTAIDVIR RMPYSPTPQI LGTLLGACRI
HQNGEMAETV AKKLFELESN HAGYYMLMSN MYGVKGEWDN VEKLRVSVKN RGIKKGLAES
VIEIKRKVHR FVADDDLHPE KVLVYGLLKQ MGLHMRKDFE SDSVYAEA
//
