ID A0A087HD20_ARAAL Unreviewed; 493 AA.
AC A0A087HD20;
DT 29-OCT-2014, integrated into UniProtKB/TrEMBL.
DT 29-OCT-2014, sequence version 1.
DT 27-MAR-2024, entry version 32.
DE RecName: Full=HTH OST-type domain-containing protein {ECO:0000259|PROSITE:PS51644};
GN OrderedLocusNames=AALP_Aa3g320100 {ECO:0000313|EMBL:KFK40022.1};
OS Arabis alpina (Alpine rock-cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Arabideae; Arabis.
OX NCBI_TaxID=50452 {ECO:0000313|EMBL:KFK40022.1, ECO:0000313|Proteomes:UP000029120};
RN [1] {ECO:0000313|Proteomes:UP000029120}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Pajares {ECO:0000313|Proteomes:UP000029120};
RX PubMed=27246759; DOI=10.1038/nplants.2014.23;
RA Willing E.M., Rawat V., Mandakova T., Maumus F., James G.V.,
RA Nordstroem K.J., Becker C., Warthmann N., Chica C., Szarzynska B.,
RA Zytnicki M., Albani M.C., Kiefer C., Bergonzi S., Castaings L.,
RA Mateos J.L., Berns M.C., Bujdoso N., Piofczyk T., de Lorenzo L.,
RA Barrero-Sicilia C., Mateos I., Piednoel M., Hagmann J., Chen-Min-Tao R.,
RA Iglesias-Fernandez R., Schuster S.C., Alonso-Blanco C., Roudier F.,
RA Carbonero P., Paz-Ares J., Davis S.J., Pecinka A., Quesneville H.,
RA Colot V., Lysak M.A., Weigel D., Coupland G., Schneeberger K.;
RT "Genome expansion of Arabis alpina linked with retrotransposition and
RT reduced symmetric DNA methylation.";
RL Nat. Plants 1:14023-14023(2015).
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; CM002871; KFK40022.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A087HD20; -.
DR EnsemblPlants; KFK40022; KFK40022; AALP_AA3G320100.
DR Gramene; KFK40022; KFK40022; AALP_AA3G320100.
DR eggNOG; ENOG502QUA6; Eukaryota.
DR OMA; FMGCHIN; -.
DR OrthoDB; 3077715at2759; -.
DR Proteomes; UP000029120; Chromosome 3.
DR GO; GO:0005777; C:peroxisome; IEA:InterPro.
DR GO; GO:0004540; F:RNA nuclease activity; IEA:InterPro.
DR GO; GO:0010468; P:regulation of gene expression; IEA:InterPro.
DR GO; GO:0006979; P:response to oxidative stress; IEA:EnsemblPlants.
DR CDD; cd08824; LOTUS; 2.
DR CDD; cd10910; PIN_limkain_b1_N_like; 1.
DR Gene3D; 3.40.50.1010; 5'-nuclease; 1.
DR Gene3D; 3.30.420.610; LOTUS domain-like; 2.
DR InterPro; IPR041966; LOTUS-like.
DR InterPro; IPR024768; Marf1.
DR InterPro; IPR021139; NYN.
DR InterPro; IPR025605; OST-HTH/LOTUS_dom.
DR PANTHER; PTHR14379; LIMKAIN B LKAP; 1.
DR PANTHER; PTHR14379:SF82; MEIOSIS REGULATOR AND MRNA STABILITY FACTOR 1; 1.
DR Pfam; PF01936; NYN; 1.
DR Pfam; PF12872; OST-HTH; 2.
DR PROSITE; PS51644; HTH_OST; 2.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000029120}.
FT DOMAIN 295..367
FT /note="HTH OST-type"
FT /evidence="ECO:0000259|PROSITE:PS51644"
FT DOMAIN 420..493
FT /note="HTH OST-type"
FT /evidence="ECO:0000259|PROSITE:PS51644"
SQ SEQUENCE 493 AA; 54568 MW; 41A45C66F05513AD CRC64;
MSSYYHNPSS SATAIVSLDS EQRITDLNMT APIIQRRSSS TDGPVAILWD IENCPVPSDV
RPEDVAGNIR RAVQLHPMIN GPLVIFSAYG DFNAFPRRVR EGCQRTGVKL VDVPNGRKDA
ADKAILLDMF LFVLDNRVPS TIILITGDVD FAPALHVLGQ RGYNVVVVIP SGVYVNSALS
SAGRFVWDWQ SIVHGEGFMP LPKPLPSFPR IGGPYLVGCG SNDYSNVDGT NDEETILYRG
VSQSCYSNSR ECSSLMVSQF HNEYSRSTMS CWPGETSTTY PSGNLESTMW VVPGDVNGLK
GQLVKLLELS GGFMPLLRVP SEYQRNFSKP LFVQDYGASK LVDLFKKMGD VIVVDGKGNK
RFVYLRSSKP NLVSPSPSPP VVLLRRPNKG KEATVGITTN GGGVSSDELS DTGSVQSERD
LEEFKLELQD ILVCYCCRIR MDYFEAIYNQ RYKRSLDYKK MGVNQLEQLF DKFRDVVAIY
EDPATGTKLI NAL
//
