ID A0A090MZN0_STRRB Unreviewed; 315 AA.
AC A0A090MZN0;
DT 26-NOV-2014, integrated into UniProtKB/TrEMBL.
DT 26-NOV-2014, sequence version 1.
DT 27-MAR-2024, entry version 49.
DE RecName: Full=Protein SEC13 homolog {ECO:0000256|ARBA:ARBA00019195};
GN ORFNames=SRAE_2000386900 {ECO:0000313|EMBL:CEF69219.1,
GN ECO:0000313|WBParaSite:SRAE_2000386900.1,
GN ECO:0000313|WormBase:SRAE_2000386900};
OS Strongyloides ratti (Parasitic roundworm).
OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
OC Tylenchina; Panagrolaimomorpha; Strongyloidoidea; Strongyloididae;
OC Strongyloides.
OX NCBI_TaxID=34506 {ECO:0000313|EMBL:CEF69219.1};
RN [1] {ECO:0000313|EMBL:CEF69219.1, ECO:0000313|Proteomes:UP000035682}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=ED321 {ECO:0000313|Proteomes:UP000035682,
RC ECO:0000313|WBParaSite:SRAE_2000386900.1}, and ED321 Heterogonic
RC {ECO:0000313|EMBL:CEF69219.1};
RA Martin A.A.;
RL Submitted (SEP-2014) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|WBParaSite:SRAE_2000386900.1}
RP IDENTIFICATION.
RG WormBaseParasite;
RL Submitted (DEC-2020) to UniProtKB.
CC -!- SUBCELLULAR LOCATION: Nucleus, nuclear pore complex
CC {ECO:0000256|ARBA:ARBA00004567}.
CC -!- SIMILARITY: Belongs to the WD repeat SEC13 family.
CC {ECO:0000256|ARBA:ARBA00010102}.
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DR EMBL; LN609529; CEF69219.1; -; Genomic_DNA.
DR STRING; 34506.A0A090MZN0; -.
DR EnsemblMetazoa; SRAE_2000386900.1; SRAE_2000386900.1; WBGene00264096.
DR WBParaSite; SRAE_2000386900.1; SRAE_2000386900.1; WBGene00264096.
DR WormBase; SRAE_2000386900; SRP09368; WBGene00264096; -.
DR eggNOG; KOG1332; Eukaryota.
DR OMA; TVDTGHE; -.
DR OrthoDB; 177928at2759; -.
DR Proteomes; UP000035682; Chromosome X.
DR GO; GO:0005764; C:lysosome; IEA:UniProtKB-KW.
DR GO; GO:0005643; C:nuclear pore; IEA:UniProtKB-SubCell.
DR GO; GO:0005198; F:structural molecule activity; IEA:InterPro.
DR GO; GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.
DR GO; GO:0015031; P:protein transport; IEA:UniProtKB-KW.
DR Gene3D; 2.130.10.10; YVTN repeat-like/Quinoprotein amine dehydrogenase; 1.
DR InterPro; IPR037363; Sec13/Seh1_fam.
DR InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR InterPro; IPR036322; WD40_repeat_dom_sf.
DR InterPro; IPR001680; WD40_rpt.
DR PANTHER; PTHR11024; NUCLEAR PORE COMPLEX PROTEIN SEC13 / SEH1 FAMILY MEMBER; 1.
DR PANTHER; PTHR11024:SF2; PROTEIN SEC13 HOMOLOG; 1.
DR Pfam; PF00400; WD40; 5.
DR SMART; SM00320; WD40; 6.
DR SUPFAM; SSF50978; WD40 repeat-like; 1.
DR PROSITE; PS50082; WD_REPEATS_2; 3.
PE 3: Inferred from homology;
KW Lysosome {ECO:0000256|ARBA:ARBA00023228};
KW mRNA transport {ECO:0000256|ARBA:ARBA00022816};
KW Nuclear pore complex {ECO:0000256|ARBA:ARBA00023132};
KW Nucleus {ECO:0000256|ARBA:ARBA00023132};
KW Protein transport {ECO:0000256|ARBA:ARBA00022927};
KW Reference proteome {ECO:0000313|Proteomes:UP000035682};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Translocation {ECO:0000256|ARBA:ARBA00023010};
KW Transport {ECO:0000256|ARBA:ARBA00022816};
KW WD repeat {ECO:0000256|ARBA:ARBA00022574, ECO:0000256|PROSITE-
KW ProRule:PRU00221}.
FT REPEAT 9..50
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 54..88
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 207..242
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
SQ SEQUENCE 315 AA; 35356 MW; 0FE16E3713276247 CRC64;
MVAALARIDA AHRDIIHDVQ MNEYGNRLAT CSADRMVKIF DVKPNNQSYP MAELSGHEGP
VWKVAWAPLA EEFLLASCSY DKKVIIWKET NLKWQKMFEY SQHEASVNSV DWAPRQHGLI
LVCGSTDGRV SIIEQVNDEW KGTCIDNAHE DGVNGVSFAP YGISGFSTDE MTAKVICKKF
VSCGNDKKVK IWSFIDGSGK WELEHTLEGH DDFVRDVAWA PFGVNGIATI ASCGQDNRVI
LWTCNYGNNE TKWKKHILDT LDEYATSLSF NTVGDVLCVS AGDSTIKLYK HLIDEWVELK
SPKKDQVKNT TKTKN
//
