ID A0A091VXU4_NIPNI Unreviewed; 824 AA.
AC A0A091VXU4;
DT 26-NOV-2014, integrated into UniProtKB/TrEMBL.
DT 26-NOV-2014, sequence version 1.
DT 27-MAR-2024, entry version 34.
DE SubName: Full=Semaphorin-4D {ECO:0000313|EMBL:KFQ94418.1};
DE Flags: Fragment;
GN ORFNames=Y956_02541 {ECO:0000313|EMBL:KFQ94418.1};
OS Nipponia nippon (Crested ibis) (Ibis nippon).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
OC Coelurosauria; Aves; Neognathae; Pelecaniformes; Threskiornithidae;
OC Nipponia.
OX NCBI_TaxID=128390 {ECO:0000313|EMBL:KFQ94418.1, ECO:0000313|Proteomes:UP000053283};
RN [1] {ECO:0000313|EMBL:KFQ94418.1, ECO:0000313|Proteomes:UP000053283}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=BGI_Y956 {ECO:0000313|EMBL:KFQ94418.1};
RA Zhang G., Li C.;
RT "Genome evolution of avian class.";
RL Submitted (APR-2014) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the semaphorin family.
CC {ECO:0000256|ARBA:ARBA00009492}.
CC -!- CAUTION: Lacks conserved residue(s) required for the propagation of
CC feature annotation. {ECO:0000256|PROSITE-ProRule:PRU00352}.
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DR EMBL; KL410147; KFQ94418.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A091VXU4; -.
DR STRING; 128390.A0A091VXU4; -.
DR eggNOG; KOG3611; Eukaryota.
DR Proteomes; UP000053283; Unassembled WGS sequence.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0030215; F:semaphorin receptor binding; IEA:InterPro.
DR GO; GO:0016043; P:cellular component organization; IEA:UniProt.
DR CDD; cd05873; Ig_Sema4D_like; 1.
DR CDD; cd11259; Sema_4D; 1.
DR Gene3D; 2.60.40.10; Immunoglobulins; 1.
DR Gene3D; 3.30.1680.10; ligand-binding face of the semaphorins, domain 2; 1.
DR Gene3D; 2.130.10.10; YVTN repeat-like/Quinoprotein amine dehydrogenase; 1.
DR InterPro; IPR007110; Ig-like_dom.
DR InterPro; IPR036179; Ig-like_dom_sf.
DR InterPro; IPR013783; Ig-like_fold.
DR InterPro; IPR003599; Ig_sub.
DR InterPro; IPR013151; Immunoglobulin.
DR InterPro; IPR002165; Plexin_repeat.
DR InterPro; IPR016201; PSI.
DR InterPro; IPR001627; Semap_dom.
DR InterPro; IPR036352; Semap_dom_sf.
DR InterPro; IPR027231; Semaphorin.
DR InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR PANTHER; PTHR11036; SEMAPHORIN; 1.
DR PANTHER; PTHR11036:SF18; SEMAPHORIN-4D; 1.
DR Pfam; PF00047; ig; 1.
DR Pfam; PF01437; PSI; 1.
DR Pfam; PF01403; Sema; 1.
DR SMART; SM00409; IG; 1.
DR SMART; SM00423; PSI; 1.
DR SMART; SM00630; Sema; 1.
DR SUPFAM; SSF48726; Immunoglobulin; 1.
DR SUPFAM; SSF103575; Plexin repeat; 1.
DR SUPFAM; SSF101912; Sema domain; 1.
DR PROSITE; PS50835; IG_LIKE; 1.
DR PROSITE; PS51004; SEMA; 1.
PE 3: Inferred from homology;
KW Glycoprotein {ECO:0000256|ARBA:ARBA00023180};
KW Membrane {ECO:0000256|ARBA:ARBA00023136, ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000053283};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 700..722
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 1..465
FT /note="Sema"
FT /evidence="ECO:0000259|PROSITE:PS51004"
FT DOMAIN 534..600
FT /note="Ig-like"
FT /evidence="ECO:0000259|PROSITE:PS50835"
FT REGION 760..806
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:KFQ94418.1"
FT NON_TER 824
FT /evidence="ECO:0000313|EMBL:KFQ94418.1"
SQ SEQUENCE 824 AA; 92540 MW; A017BE1820891C5B CRC64;
EVQLIHFHEL EVSNYSTLLL SEDKDVLYVG AREVIFALNA VNIAEKQHEL HWKVTEDKRT
KCAVKGKSEQ TECRNYVRVL QQLNDTFLYV CGTNAFQPTC DYLNLISFEL GGKNEDGKGR
CPFDPAQSYT SVMVDEELYS GTSYNFLGSE PIISRHSHQS PLRTEYAIPW LNEPNFVFAD
VIRADQNGTD GEDDKIYFFF TEVSVEYEFV GKLMIPRIAR VCKRDQGGLR TLQKKWTSFL
KARLICTIPD KNLIFNIIND VFILKSPTLK EPVIYGVFTP QLNNVGLSAV CAYNLSTVEE
VFSKGKYMQS ATVEQSHTKW VRYNGEIPNP RPGACINNEA RASNYMSSLN LPDKTLQFVK
DHPLMDDSVT PMGDRPRLVK RDVKYTQIVV DRVRALNGTI YDVMFISTDR GALHKAISYE
NGMHIIEETQ LFPNFEPVQT LLLSSKKGRR YLYAGSNSGV VQSPVAFCDK YTTCVDCVLA
RDPYCAWKPV EASCIDIFKE SEIERNWIQN IGGDASSCSD KVRENSLQHT FKHGSTAELK
CSQKSNLAQV VWKFKDDVLR VESPKYRLLE KALLIFNLSE GDSGVYQCLS EEKVKNKKFS
QVLAKHVLEL KKIQHTTVGP TVAAAPTEGN SDVPKVSAVS TEGSAAHTST TQMVPVTTAR
IITKPVGPVL TSAASNTELF NSIPDAVPEK TMFLKSNDNF LLMFLFLFFF ILFLCLLSYN
CYKGYLPGQC LKFRSVVLLG KKKTKSDFSD CEQSVKETLV EQGSVSHQSG EQPKPAHDTG
YETEPDCGNG QLQPGDSQAS REAKDKPFDV KCELKYADSD VEGD
//
