ID A0A093CKT4_9AVES Unreviewed; 459 AA.
AC A0A093CKT4;
DT 26-NOV-2014, integrated into UniProtKB/TrEMBL.
DT 26-NOV-2014, sequence version 1.
DT 27-MAR-2024, entry version 39.
DE SubName: Full=H/ACA ribonucleoprotein complex subunit 4 {ECO:0000313|EMBL:KFV16480.1};
DE Flags: Fragment;
GN ORFNames=N339_02454 {ECO:0000313|EMBL:KFV16480.1};
OS Pterocles gutturalis (yellow-throated sandgrouse).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
OC Coelurosauria; Aves; Neognathae; Ciconiiformes; Pteroclidae; Pterocles.
OX NCBI_TaxID=240206 {ECO:0000313|EMBL:KFV16480.1, ECO:0000313|Proteomes:UP000053149};
RN [1] {ECO:0000313|EMBL:KFV16480.1, ECO:0000313|Proteomes:UP000053149}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=BGI_N339 {ECO:0000313|EMBL:KFV16480.1};
RA Zhang G., Li C.;
RT "Genome evolution of avian class.";
RL Submitted (APR-2014) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the pseudouridine synthase TruB family.
CC {ECO:0000256|ARBA:ARBA00008999}.
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DR EMBL; KL248624; KFV16480.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A093CKT4; -.
DR Proteomes; UP000053149; Unassembled WGS sequence.
DR GO; GO:0005654; C:nucleoplasm; IEA:UniProt.
DR GO; GO:1990904; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
DR GO; GO:0009982; F:pseudouridine synthase activity; IEA:InterPro.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR GO; GO:0001522; P:pseudouridine synthesis; IEA:InterPro.
DR GO; GO:0006396; P:RNA processing; IEA:InterPro.
DR CDD; cd02572; PseudoU_synth_hDyskerin; 1.
DR CDD; cd21148; PUA_Cbf5; 1.
DR Gene3D; 3.30.2350.10; Pseudouridine synthase; 1.
DR Gene3D; 2.30.130.10; PUA domain; 1.
DR InterPro; IPR012960; Dyskerin-like.
DR InterPro; IPR020103; PsdUridine_synth_cat_dom_sf.
DR InterPro; IPR002501; PsdUridine_synth_N.
DR InterPro; IPR002478; PUA.
DR InterPro; IPR015947; PUA-like_sf.
DR InterPro; IPR036974; PUA_sf.
DR InterPro; IPR004802; tRNA_PsdUridine_synth_B_fam.
DR InterPro; IPR032819; TruB_C.
DR InterPro; IPR004521; Uncharacterised_CHP00451.
DR NCBIfam; TIGR00425; CBF5; 1.
DR NCBIfam; TIGR00451; unchar_dom_2; 1.
DR PANTHER; PTHR23127; CENTROMERE/MICROTUBULE BINDING PROTEIN CBF5; 1.
DR PANTHER; PTHR23127:SF0; H_ACA RIBONUCLEOPROTEIN COMPLEX SUBUNIT DKC1; 1.
DR Pfam; PF08068; DKCLD; 1.
DR Pfam; PF01472; PUA; 1.
DR Pfam; PF16198; TruB_C_2; 1.
DR Pfam; PF01509; TruB_N; 1.
DR SMART; SM01136; DKCLD; 1.
DR SMART; SM00359; PUA; 1.
DR SUPFAM; SSF55120; Pseudouridine synthase; 1.
DR SUPFAM; SSF88697; PUA domain-like; 1.
DR PROSITE; PS50890; PUA; 1.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000053149};
KW Ribonucleoprotein {ECO:0000313|EMBL:KFV16480.1};
KW RNA-binding {ECO:0000256|ARBA:ARBA00022884}.
FT DOMAIN 3..49
FT /note="Dyskerin-like"
FT /evidence="ECO:0000259|SMART:SM01136"
FT DOMAIN 240..314
FT /note="PUA"
FT /evidence="ECO:0000259|SMART:SM00359"
FT REGION 366..459
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 379..393
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:KFV16480.1"
FT NON_TER 459
FT /evidence="ECO:0000313|EMBL:KFV16480.1"
SQ SEQUENCE 459 AA; 51415 MW; 64A7D658E098BA13 CRC64;
NFDKLNVMTA HYTPLPSGAN PLKREISDYV RSGFINLDKP SNPSSHEVVA WIRRILRVEK
TGHSGTLDPK VTGCLIVCIE RATRLVKSQQ SAGKEYVGIV RLHNAIESEA QLARAIETLT
GALFQRPPLI AAVKRQLRVR TIYESKLVEY DPERRLGIFW VSCEAGTYIR TLCVHLGLLL
GVGGQMQELR RVRSGILGEK DNMVTMHDVL DAQWQYDNNK DDSYLRRVIL PLEKLLTSHK
RLVMKDSAVN AICYGAKIML PGVLRYEDGI ELNQEIVVIT TKGEAICLAI ALMTTAVIST
CDHGIVAKIK RVIMERDTYP RKWGLGPKAS QKKIMIQKGL LDKHGKPNES TPDSWKKEYV
DYRDASKKEA AAVPQGVSER APKRKRESES ESEEAVTPPS PATPPPEELS KKEKKKKKKE
KKAKEAAESG GEQIEVTSEA GTKKKKKKKK QKEVEESSE
//
