ID A0A093QIF3_9PASS Unreviewed; 1153 AA.
AC A0A093QIF3;
DT 26-NOV-2014, integrated into UniProtKB/TrEMBL.
DT 26-NOV-2014, sequence version 1.
DT 27-MAR-2024, entry version 22.
DE RecName: Full=Replication factor C subunit 1 {ECO:0000256|ARBA:ARBA00020401};
DE Flags: Fragment;
GN ORFNames=N305_05085 {ECO:0000313|EMBL:KFW83862.1};
OS Manacus vitellinus (golden-collared manakin).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
OC Coelurosauria; Aves; Neognathae; Passeriformes; Pipridae; Manacus.
OX NCBI_TaxID=328815 {ECO:0000313|EMBL:KFW83862.1, ECO:0000313|Proteomes:UP000053258};
RN [1] {ECO:0000313|EMBL:KFW83862.1, ECO:0000313|Proteomes:UP000053258}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=BGI_N305 {ECO:0000313|EMBL:KFW83862.1};
RA Zhang G., Li C.;
RT "Genome evolution of avian class.";
RL Submitted (JUN-2014) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the activator 1 large subunit family.
CC {ECO:0000256|ARBA:ARBA00006116}.
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DR EMBL; KL671838; KFW83862.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A093QIF3; -.
DR STRING; 328815.ENSMVIP00005011420; -.
DR Proteomes; UP000053258; Unassembled WGS sequence.
DR GO; GO:0005663; C:DNA replication factor C complex; IEA:InterPro.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW.
DR GO; GO:0005524; F:ATP binding; IEA:InterPro.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0003689; F:DNA clamp loader activity; IEA:InterPro.
DR GO; GO:0006281; P:DNA repair; IEA:InterPro.
DR GO; GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
DR CDD; cd00009; AAA; 1.
DR CDD; cd17752; BRCT_RFC1; 1.
DR CDD; cd18140; HLD_clamp_RFC; 1.
DR Gene3D; 1.10.8.60; -; 1.
DR Gene3D; 1.20.272.10; -; 1.
DR Gene3D; 3.40.50.10190; BRCT domain; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR InterPro; IPR003593; AAA+_ATPase.
DR InterPro; IPR003959; ATPase_AAA_core.
DR InterPro; IPR001357; BRCT_dom.
DR InterPro; IPR036420; BRCT_dom_sf.
DR InterPro; IPR008921; DNA_pol3_clamp-load_cplx_C.
DR InterPro; IPR013725; DNA_replication_fac_RFC1_C.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR012178; RFC1.
DR InterPro; IPR047854; RFC_lid.
DR PANTHER; PTHR23389; CHROMOSOME TRANSMISSION FIDELITY FACTOR 18; 1.
DR PANTHER; PTHR23389:SF36; REPLICATION FACTOR C SUBUNIT 1; 1.
DR Pfam; PF00004; AAA; 1.
DR Pfam; PF00533; BRCT; 1.
DR Pfam; PF08519; RFC1; 1.
DR PIRSF; PIRSF036578; RFC1; 1.
DR SMART; SM00382; AAA; 1.
DR SMART; SM00292; BRCT; 1.
DR SUPFAM; SSF52113; BRCT domain; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR SUPFAM; SSF48019; post-AAA+ oligomerization domain-like; 1.
DR PROSITE; PS50172; BRCT; 1.
PE 3: Inferred from homology;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW DNA replication {ECO:0000256|ARBA:ARBA00022705};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Reference proteome {ECO:0000313|Proteomes:UP000053258}.
FT DOMAIN 405..483
FT /note="BRCT"
FT /evidence="ECO:0000259|PROSITE:PS50172"
FT REGION 1..97
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 126..381
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 496..547
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1082..1153
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 18..94
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 160..182
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 183..249
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 250..266
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 284..305
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 321..381
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1101..1115
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1116..1146
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:KFW83862.1"
FT NON_TER 1153
FT /evidence="ECO:0000313|EMBL:KFW83862.1"
SQ SEQUENCE 1153 AA; 128572 MW; 3DAD842F7C37B836 CRC64;
DIRKFFGVVP PGKRQQCETL TKSEKIKNGE GPSSGKKREK ETKVNSSPSE DDSKQKRTKK
KRRVIYDSDS EEEVQSVKKS KKTPEKKAAT SKLGKVLKRD PVVYISETEY SSCLDEEDDF
VNKRISLKPK ENGTSVVGCP GTNSVKKEDV KPQAKSKPLP PVKQTPTSAL DYFGTSNVQR
SEKKLVSSKR KEPSQSRDST LDDEAIARQL QLEEDSELER QLHEDEEFAR TLAMLDETPQ
KKKARKDTGG EQTVQSINSS PNVPAGYKQS ERGETKNYTA KPENKSEQCK GFNLSPQSSD
GKTARVSADK TLPLKPASKL VSLKQKEEIA EKERGAQNLV SKQKTASEKE EKTTPKKEKI
SPKKSEVGSV SPEDSEKKRS NYQAYRSFLN REGPKALGSK EIPQGAENCL EGLTFVITGV
LECIERDEAK SLIERYGGKV TGNVSKKTNY LVMGRDCGQS KCEKASALGT KVIDEDGLFD
LIRTMPGKKS KYELAAEAET KKVESRPKRT PPKAEAGKRN FSPFKREADT KKYKSPPEKE
DTVKSVKKET TAVRKLMDFT RQTAEEKKAP KPEGNLVSEV NEDGTERLLW VDKYKPASLK
ALIGQQGEQS CANKLLRWLR NWHRNTLEDG QAKTNKAGSK DDGTSFKAAL LSGPPGVGKT
TTAALVCKEL GYSYVELNAS DTRSKNSLKE VVAESLNNTS IKDFCSGTSS SVSGKHVLIM
DEVDGMAGNE DRGGIQELIG LIRHTKIPII CMCNDRNHPK IRSLVHYCLD LRFQRPRLEQ
IKGAMMSIAF KEGLKIPPPA MQEIILAANQ DIRQVLHNLN MWCAKDKSLT YDEAKTDASR
AKKDIKLGPF DVVRKVFATG EEASRMSLID KSDLFFHDYS LAPLFVQENY VHVKPAAAGG
NLKKHLVLLS KAADSICDGD IVDKQIRSKQ NWNLLPTQAI YASVLPGELM RGYMSQFPVF
PSWLGKFSST GKHDRIIQEL AMHMSLRTQA CKRTVNMEYL SYLRDALVKP LKDLGADGVQ
QAIAFMDSYC LMKEDIENIM EISTWGGQPS SFSKLDSKVK AAFTRAYNKE AHLTPYSLSS
LKASKRQSGS AGTLELSEDL NVEETQSDED EQDTVESDAM IKQKKAKSSR LPKREKNEET
TKKEGKRKEK TRH
//
