ID A0A093QR76_PHACA Unreviewed; 496 AA.
AC A0A093QR76;
DT 26-NOV-2014, integrated into UniProtKB/TrEMBL.
DT 26-NOV-2014, sequence version 1.
DT 27-MAR-2024, entry version 33.
DE RecName: Full=Polypyrimidine tract-binding protein 1 {ECO:0000256|ARBA:ARBA00019540};
DE Flags: Fragment;
GN ORFNames=N336_06171 {ECO:0000313|EMBL:KFW91046.1};
OS Phalacrocorax carbo (Great cormorant) (Pelecanus carbo).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
OC Coelurosauria; Aves; Neognathae; Suliformes; Phalacrocoracidae;
OC Phalacrocorax.
OX NCBI_TaxID=9209 {ECO:0000313|EMBL:KFW91046.1, ECO:0000313|Proteomes:UP000053238};
RN [1] {ECO:0000313|EMBL:KFW91046.1, ECO:0000313|Proteomes:UP000053238}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=BGI_N336 {ECO:0000313|EMBL:KFW91046.1};
RA Zhang G., Li C.;
RT "Genome evolution of avian class.";
RL Submitted (APR-2014) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
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DR EMBL; KL428881; KFW91046.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A093QR76; -.
DR Proteomes; UP000053238; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
DR GO; GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
DR CDD; cd12777; RRM1_PTBP1; 1.
DR CDD; cd12782; RRM2_PTBP1; 1.
DR CDD; cd12695; RRM3_PTBP1; 1.
DR CDD; cd12701; RRM4_PTBP1; 1.
DR Gene3D; 3.30.70.330; -; 4.
DR InterPro; IPR006536; HnRNP-L/PTB.
DR InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR InterPro; IPR021790; PTBP1-like_RRM2.
DR InterPro; IPR035000; PTBP1_RRM1.
DR InterPro; IPR035001; PTBP1_RRM3.
DR InterPro; IPR035979; RBD_domain_sf.
DR InterPro; IPR000504; RRM_dom.
DR NCBIfam; TIGR01649; hnRNP-L_PTB; 1.
DR PANTHER; PTHR15592; MATRIN 3/NUCLEAR PROTEIN 220-RELATED; 1.
DR PANTHER; PTHR15592:SF19; POLYPYRIMIDINE TRACT-BINDING PROTEIN 1; 1.
DR Pfam; PF00076; RRM_1; 1.
DR Pfam; PF13893; RRM_5; 1.
DR Pfam; PF11835; RRM_8; 1.
DR SMART; SM00360; RRM; 4.
DR SUPFAM; SSF54928; RNA-binding domain, RBD; 4.
DR PROSITE; PS50102; RRM; 4.
PE 4: Predicted;
KW Acetylation {ECO:0000256|ARBA:ARBA00022990};
KW Activator {ECO:0000256|ARBA:ARBA00023159};
KW mRNA processing {ECO:0000256|ARBA:ARBA00022664};
KW mRNA splicing {ECO:0000256|ARBA:ARBA00023187};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000053238};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW RNA-binding {ECO:0000256|ARBA:ARBA00022884, ECO:0000256|PROSITE-
KW ProRule:PRU00176}; Ubl conjugation {ECO:0000256|ARBA:ARBA00022843}.
FT DOMAIN 25..109
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT DOMAIN 149..225
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT DOMAIN 302..376
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT DOMAIN 419..494
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:KFW91046.1"
FT NON_TER 496
FT /evidence="ECO:0000313|EMBL:KFW91046.1"
SQ SEQUENCE 496 AA; 53864 MW; E1E7B03CF6249C67 CRC64;
LLFTANGNDS KKFKGDSRSA GVPSRVIHVR KLPSDVTEAE VISLGLPFGK VTNLLMLKGK
NQAFIEMNTE EAANTMVNYY TTVTPVLRSQ PIYIQFSNHK ELKTDNSPNQ AVSCSLQAVN
SVQSGNLALS ASAAAVDAGM AMAGQSPVLR IIVENLFYPV TLDVLHQIFS KFGTVLKIIT
FTKNNQFQAL LQYADPVSAQ HAKLSLDGQN IYNACCTLRI DFSKLTSLNV KYNNDKSRDY
TRPDLPSGDN QPSLDQTMAA AFGLSVPNVH GALAPLAIPS AAAAAAAAGR IAIPGLAGAG
NSVLLVSNLN PEVITPQCLF ILFGVYGDVQ RVKILFNKKE NALVQMADGN QAQLAMSHLN
GQKLHGKPIR ITLSKHQTVQ LPRDGQEDQG LTKDYGNSPL HRFKKPGSKN FQNIFPPSAT
LHLSNIPPSI TEEDLKMLFS SNGGMVKGFK FFQKDRKMAL IQMGSVEEAI QSLIDLHNHD
LGENHHLRVS FSKSTI
//
