ID A0A093YJG8_9PEZI Unreviewed; 985 AA.
AC A0A093YJG8;
DT 26-NOV-2014, integrated into UniProtKB/TrEMBL.
DT 26-NOV-2014, sequence version 1.
DT 27-MAR-2024, entry version 44.
DE RecName: Full=116 kDa U5 small nuclear ribonucleoprotein component {ECO:0000256|ARBA:ARBA00018774};
DE AltName: Full=U5 snRNP-specific protein, 116 kDa {ECO:0000256|ARBA:ARBA00031432};
GN ORFNames=O988_00302 {ECO:0000313|EMBL:KFY05044.1};
OS Pseudogymnoascus sp. VKM F-3808.
OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Leotiomycetes;
OC Leotiomycetes incertae sedis; Pseudeurotiaceae; Pseudogymnoascus.
OX NCBI_TaxID=1391699 {ECO:0000313|EMBL:KFY05044.1, ECO:0000313|Proteomes:UP000029329};
RN [1] {ECO:0000313|EMBL:KFY05044.1, ECO:0000313|Proteomes:UP000029329}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=VKM F-3808 {ECO:0000313|EMBL:KFY05044.1,
RC ECO:0000313|Proteomes:UP000029329};
RA Leushkin E.V., Logacheva M.D., Penin A.A., Sutormin R.A., Gerasimov E.S.,
RA Kochkina G.A., Ivanushkina N.E., Vasilenko O.V., Kondrashov A.S.,
RA Ozerskaya S.M.;
RT "Population genomics of a fungus Geomyces pannorum provides evidence of
RT horizontal gene transfer but not of sexual reproduction.";
RL Submitted (JUL-2014) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KFY05044.1}.
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DR EMBL; JPJR01000050; KFY05044.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A093YJG8; -.
DR STRING; 1391699.A0A093YJG8; -.
DR HOGENOM; CLU_002794_11_2_1; -.
DR Proteomes; UP000029329; Unassembled WGS sequence.
DR GO; GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
DR GO; GO:0005525; F:GTP binding; IEA:UniProtKB-KW.
DR GO; GO:0003924; F:GTPase activity; IEA:InterPro.
DR GO; GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
DR GO; GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
DR CDD; cd04098; eEF2_C_snRNP; 1.
DR CDD; cd04090; EF2_II_snRNP; 1.
DR CDD; cd01683; EF2_IV_snRNP; 1.
DR CDD; cd16264; snRNP_III; 1.
DR CDD; cd04167; Snu114p; 1.
DR Gene3D; 3.30.230.10; -; 1.
DR Gene3D; 3.30.70.240; -; 1.
DR Gene3D; 3.30.70.870; Elongation Factor G (Translational Gtpase), domain 3; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR Gene3D; 2.40.30.10; Translation factors; 1.
DR Gene3D; 3.90.1430.10; Yeast translation eEF2 (G' domain); 1.
DR InterPro; IPR041095; EFG_II.
DR InterPro; IPR035647; EFG_III/V.
DR InterPro; IPR000640; EFG_V-like.
DR InterPro; IPR004161; EFTu-like_2.
DR InterPro; IPR031950; EFTUD2_N.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR020568; Ribosomal_Su5_D2-typ_SF.
DR InterPro; IPR014721; Ribsml_uS5_D2-typ_fold_subgr.
DR InterPro; IPR005225; Small_GTP-bd_dom.
DR InterPro; IPR044121; Snu114_GTP-bd.
DR InterPro; IPR000795; T_Tr_GTP-bd_dom.
DR InterPro; IPR009000; Transl_B-barrel_sf.
DR InterPro; IPR005517; Transl_elong_EFG/EF2_IV.
DR InterPro; IPR035655; U5-116kDa_C.
DR NCBIfam; TIGR00231; small_GTP; 1.
DR PANTHER; PTHR42908:SF6; 116 KDA U5 SMALL NUCLEAR RIBONUCLEOPROTEIN COMPONENT; 1.
DR PANTHER; PTHR42908; TRANSLATION ELONGATION FACTOR-RELATED; 1.
DR Pfam; PF00679; EFG_C; 1.
DR Pfam; PF14492; EFG_III; 1.
DR Pfam; PF03764; EFG_IV; 1.
DR Pfam; PF16004; EFTUD2; 1.
DR Pfam; PF00009; GTP_EFTU; 1.
DR Pfam; PF03144; GTP_EFTU_D2; 1.
DR PRINTS; PR00315; ELONGATNFCT.
DR SMART; SM00838; EFG_C; 1.
DR SMART; SM00889; EFG_IV; 1.
DR SUPFAM; SSF54980; EF-G C-terminal domain-like; 2.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR SUPFAM; SSF54211; Ribosomal protein S5 domain 2-like; 1.
DR SUPFAM; SSF50447; Translation proteins; 1.
DR PROSITE; PS51722; G_TR_2; 1.
PE 4: Predicted;
KW GTP-binding {ECO:0000256|ARBA:ARBA00023134};
KW mRNA processing {ECO:0000256|ARBA:ARBA00022664};
KW mRNA splicing {ECO:0000256|ARBA:ARBA00023187};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000029329};
KW Spliceosome {ECO:0000256|ARBA:ARBA00022728}.
FT DOMAIN 132..422
FT /note="Tr-type G"
FT /evidence="ECO:0000259|PROSITE:PS51722"
FT REGION 1..28
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1..16
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 985 AA; 109745 MW; 836E168258B882DD CRC64;
MDDLYDEFGN FIGEAEESED DSQHGIDASA YVYDQEYPEE EAPEVTGQEL MEIDEDGPSN
AVILHEDKQY YPTAQQVYGE DVETMVQEED AQPLTQPIIA PVEVKKFQLE EADLPPVHFD
RPFMADLMNF PDQVRNVAFA GHLHHGKTAL MDMLVLETHD ISDRLENRVG KARDEQLRYT
DTSILERDRG LSIKAAPMSL VLQNTKGKSH LINMIDTPGH VNFVDEVAAS LRLVDGVVLV
VDVVEGVQVN TEQIIKYAVL EDLPLVLVVN KLDRLILELK LPPTDAYFKL KHVIEEVNTA
IENALPGQGE KRRLSPEKGN VLFACSSMQW CFTLQSFARM YADTYPGISA TEFARRLWGD
VFFNPTKRSF TRKGTEERSK RSFVNFILEP IYKLYSHTIS ESPEDLKETL ATLNIHLKPS
QYKTDAKVLL NLVCAQFFGP ATGFVDMVVE HIPSPVEGAQ KKLQQYYTGP LDTKVAESMA
KCDQDGPLVV QISKLFNTSD ASGFNAFGRV LSGTAKPGQQ VRVLGEGYSV HDEEDMALAT
ISDVWIAESR YNIPTDGIPA GNWCLLGGVD NSIVKSSTLV PLKLEDDEEA YIFKPIKQLT
ESVFKVAVEP INPSELPKML DGLRKINKSY PLITTKVEES GEHVILGTGE LYMDCVLYDL
RRLYAEMEIK VSDPVTRFCE TVVETSAIKC YALSPNKKVK ITMVAEPLDS GIAEDIESGK
VSIRDPVRKT GKFFEENYGW DLLASRSIWA FGPDDIGPNI LQDDTLPSEV DKKLLATVRD
TIRQGFSWGT REGPLCEEPI RNTKFKITDA TLAASPIFRG GGQIIPTSRR AVYSSFLMAS
PRLMEPVYSV AMTGPADSVS SLYTVLARRR GHVLSDGPIA GTPLYRCQGL IPVIDSFGFE
TDLRIHTQGQ AAVSLVFERW NIVPGDPLDR EVTLRPLEPA SVQATARDFV LKTRRRKGLS
EDVSVAKFLE PELFSSLKES GLLDG
//
