ID A0A097QMT9_9VIBR Unreviewed; 282 AA.
AC A0A097QMT9;
DT 07-JAN-2015, integrated into UniProtKB/TrEMBL.
DT 07-JAN-2015, sequence version 1.
DT 27-MAR-2024, entry version 56.
DE SubName: Full=RpiR family transcriptional regulator {ECO:0000313|EMBL:KJY75304.1, ECO:0000313|EMBL:NOH39647.1};
GN ORFNames=F0224_20925 {ECO:0000313|EMBL:NOI78138.1}, F0267_15525
GN {ECO:0000313|EMBL:NOH39647.1}, TW71_07490
GN {ECO:0000313|EMBL:KJY75304.1};
OS Vibrio coralliilyticus.
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Vibrionales; Vibrionaceae;
OC Vibrio.
OX NCBI_TaxID=190893 {ECO:0000313|EMBL:NOH39647.1, ECO:0000313|Proteomes:UP000577246};
RN [1] {ECO:0000313|EMBL:KJY75304.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=S2052 {ECO:0000313|EMBL:KJY75304.1};
RX PubMed=25879706; DOI=10.1186/s12864-015-1365-z;
RA Machado H., Sonnenschein E.C., Melchiorsen J., Gram L.;
RT "Genome mining reveals unlocked bioactive potential of marine Gram-negative
RT bacteria.";
RL BMC Genomics 16:158-158(2015).
RN [2] {ECO:0000313|Proteomes:UP000528382, ECO:0000313|Proteomes:UP000577246}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=AIC-5 {ECO:0000313|EMBL:NOI78138.1,
RC ECO:0000313|Proteomes:UP000528382}, and X00-12-4
RC {ECO:0000313|EMBL:NOH39647.1, ECO:0000313|Proteomes:UP000577246};
RA Kehlet-Delgado H., Mueller R.S.;
RT "Draft genome sequencing and comparative genomics of hatchery-associated
RT Vibrios.";
RL Submitted (SEP-2019) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:NOH39647.1}.
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DR EMBL; JXXR01000007; KJY75304.1; -; Genomic_DNA.
DR EMBL; VTYS01000015; NOH39647.1; -; Genomic_DNA.
DR EMBL; VTXB01000011; NOI78138.1; -; Genomic_DNA.
DR RefSeq; WP_006957693.1; NZ_VTYS01000015.1.
DR STRING; 190893.BA953_06390; -.
DR GeneID; 66918132; -.
DR KEGG; vct:JV59_36605; -.
DR KEGG; vcy:IX92_02105; -.
DR OrthoDB; 3684496at2; -.
DR Proteomes; UP000528382; Unassembled WGS sequence.
DR Proteomes; UP000577246; Unassembled WGS sequence.
DR GO; GO:0097367; F:carbohydrate derivative binding; IEA:InterPro.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR GO; GO:1901135; P:carbohydrate derivative metabolic process; IEA:InterPro.
DR CDD; cd05013; SIS_RpiR; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR000281; HTH_RpiR.
DR InterPro; IPR047640; RpiR-like.
DR InterPro; IPR035472; RpiR-like_SIS.
DR InterPro; IPR001347; SIS_dom.
DR InterPro; IPR046348; SIS_dom_sf.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR PANTHER; PTHR30514; GLUCOKINASE; 1.
DR PANTHER; PTHR30514:SF17; HTH-TYPE TRANSCRIPTIONAL REGULATOR MURR; 1.
DR Pfam; PF01418; HTH_6; 1.
DR Pfam; PF01380; SIS; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 1.
DR SUPFAM; SSF53697; SIS domain; 1.
DR PROSITE; PS51071; HTH_RPIR; 1.
DR PROSITE; PS51464; SIS; 1.
PE 4: Predicted;
FT DOMAIN 1..77
FT /note="HTH rpiR-type"
FT /evidence="ECO:0000259|PROSITE:PS51071"
FT DOMAIN 125..265
FT /note="SIS"
FT /evidence="ECO:0000259|PROSITE:PS51464"
SQ SEQUENCE 282 AA; 30616 MW; A13958E0E61034B9 CRC64;
MKGLARIRAL LPQLSPADNK IARYLLEYPQ QVKQFSSPEL AKAIGVSQST IVKFSQKIGY
SGFSDLKIRL YESELAYQPS SKKAIHGTIS RSDNMALVMA KLLSSKQQSL DRTVALNDAD
TIQQAAGYLH LAGKIQIAGV GASSLVAKDL SYKLTKIGHA VHCEYDAHIQ IANAAALSEN
DVLVALSYSG RSREVLSIAQ LARSKGAKVI IISQLAPTPL DRYADIKLMT AADEEQIRSS
SITARDSQLL MTDLLFIALT QQEESADQLI EQSKSAVAVL KQ
//
