GenomeNet

Database: UniProt
Entry: A0A097R0H4_HAFAL
LinkDB: A0A097R0H4_HAFAL
Original site: A0A097R0H4_HAFAL 
ID   A0A097R0H4_HAFAL        Unreviewed;       332 AA.
AC   A0A097R0H4;
DT   07-JAN-2015, integrated into UniProtKB/TrEMBL.
DT   07-JAN-2015, sequence version 1.
DT   24-JAN-2024, entry version 42.
DE   SubName: Full=Transcriptional regulator {ECO:0000313|EMBL:AIU72238.1};
GN   ORFNames=AT03_07470 {ECO:0000313|EMBL:AIU72238.1};
OS   Hafnia alvei FB1.
OC   Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
OC   Hafniaceae; Hafnia.
OX   NCBI_TaxID=1453496 {ECO:0000313|EMBL:AIU72238.1, ECO:0000313|Proteomes:UP000029986};
RN   [1] {ECO:0000313|EMBL:AIU72238.1, ECO:0000313|Proteomes:UP000029986}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=FB1 {ECO:0000313|EMBL:AIU72238.1,
RC   ECO:0000313|Proteomes:UP000029986};
RX   PubMed=25075225; DOI=10.1186/1757-4749-6-29;
RA   Tan J.Y., Yin W.F., Chan K.G.;
RT   "Gene clusters of Hafnia alvei strain FB1 important in survival and
RT   pathogenesis: a draft genome perspective.";
RL   Gut Pathog. 6:29-29(2014).
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DR   EMBL; CP009706; AIU72238.1; -; Genomic_DNA.
DR   RefSeq; WP_038502084.1; NZ_CP009706.1.
DR   AlphaFoldDB; A0A097R0H4; -.
DR   KEGG; hav:AT03_07470; -.
DR   PATRIC; fig|1453496.5.peg.1483; -.
DR   eggNOG; COG1609; Bacteria.
DR   HOGENOM; CLU_037628_6_0_6; -.
DR   OrthoDB; 9798934at2; -.
DR   Proteomes; UP000029986; Chromosome.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR   CDD; cd01392; HTH_LacI; 1.
DR   CDD; cd06270; PBP1_GalS-like; 1.
DR   Gene3D; 3.40.50.2300; -; 2.
DR   Gene3D; 1.10.260.40; lambda repressor-like DNA-binding domains; 1.
DR   InterPro; IPR000843; HTH_LacI.
DR   InterPro; IPR046335; LacI/GalR-like_sensor.
DR   InterPro; IPR010982; Lambda_DNA-bd_dom_sf.
DR   InterPro; IPR028082; Peripla_BP_I.
DR   PANTHER; PTHR30146:SF55; HTH-TYPE TRANSCRIPTIONAL REGULATOR GALS; 1.
DR   PANTHER; PTHR30146; LACI-RELATED TRANSCRIPTIONAL REPRESSOR; 1.
DR   Pfam; PF00356; LacI; 1.
DR   Pfam; PF13377; Peripla_BP_3; 1.
DR   PRINTS; PR00036; HTHLACI.
DR   SMART; SM00354; HTH_LACI; 1.
DR   SUPFAM; SSF47413; lambda repressor-like DNA-binding domains; 1.
DR   SUPFAM; SSF53822; Periplasmic binding protein-like I; 1.
DR   PROSITE; PS00356; HTH_LACI_1; 1.
DR   PROSITE; PS50932; HTH_LACI_2; 1.
PE   4: Predicted;
KW   DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW   Reference proteome {ECO:0000313|Proteomes:UP000029986};
KW   Transcription {ECO:0000256|ARBA:ARBA00023163};
KW   Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT   DOMAIN          2..56
FT                   /note="HTH lacI-type"
FT                   /evidence="ECO:0000259|PROSITE:PS50932"
SQ   SEQUENCE   332 AA;  36095 MW;  0D2CE54F37E61F88 CRC64;
     MITIRDVARL AGVSVATVSR VLNNTAITTP ETKAVVQSAV AELGYRPNAN AQALATQSSD
     MLGVVVMDVS DPFFGALVKG VDEVAQRERK NLLIANSYHD ADKERKAIEM LIRQRCNALI
     VHAKMLSDDE LVAFMQQVPG MVLINRIVPS YEHRCVGLNN LAGGQMATQL LLDKGHRRIG
     FLGSNHQIED QMMRQKGYET AMQLAGIEIG KAWCAYASPD LQGGEAAMVE LLGRNQQLSA
     VFAYNDAMAA GALAVLKENG ISIPEQFSIV GFDDIPIARY TSPKLTTVRY PIVSMATLAS
     ELALKSVHQT PLSPNGHCFM PTLVQRWSVG SR
//
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