GenomeNet

Database: UniProt
Entry: A0A0A0LI38_CUCSA
LinkDB: A0A0A0LI38_CUCSA
Original site: A0A0A0LI38_CUCSA 
ID   A0A0A0LI38_CUCSA        Unreviewed;      1123 AA.
AC   A0A0A0LI38;
DT   07-JAN-2015, integrated into UniProtKB/TrEMBL.
DT   07-JAN-2015, sequence version 1.
DT   27-MAR-2024, entry version 39.
DE   SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KGN59721.1};
GN   ORFNames=Csa_3G840960 {ECO:0000313|EMBL:KGN59721.1};
OS   Cucumis sativus (Cucumber).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis.
OX   NCBI_TaxID=3659 {ECO:0000313|EMBL:KGN59721.1, ECO:0000313|Proteomes:UP000029981};
RN   [1] {ECO:0000313|EMBL:KGN59721.1, ECO:0000313|Proteomes:UP000029981}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. 9930 {ECO:0000313|Proteomes:UP000029981};
RX   PubMed=19881527; DOI=10.1038/ng.475;
RA   Huang S., Li R., Zhang Z., Li L., Gu X., Fan W., Lucas W.J., Wang X.,
RA   Xie B., Ni P., Ren Y., Zhu H., Li J., Lin K., Jin W., Fei Z., Li G.,
RA   Staub J., Kilian A., van der Vossen E.A., Wu Y., Guo J., He J., Jia Z.,
RA   Ren Y., Tian G., Lu Y., Ruan J., Qian W., Wang M., Huang Q., Li B.,
RA   Xuan Z., Cao J., Asan null, Wu Z., Zhang J., Cai Q., Bai Y., Zhao B.,
RA   Han Y., Li Y., Li X., Wang S., Shi Q., Liu S., Cho W.K., Kim J.Y., Xu Y.,
RA   Heller-Uszynska K., Miao H., Cheng Z., Zhang S., Wu J., Yang Y., Kang H.,
RA   Li M., Liang H., Ren X., Shi Z., Wen M., Jian M., Yang H., Zhang G.,
RA   Yang Z., Chen R., Liu S., Li J., Ma L., Liu H., Zhou Y., Zhao J., Fang X.,
RA   Li G., Fang L., Li Y., Liu D., Zheng H., Zhang Y., Qin N., Li Z., Yang G.,
RA   Yang S., Bolund L., Kristiansen K., Zheng H., Li S., Zhang X., Yang H.,
RA   Wang J., Sun R., Zhang B., Jiang S., Wang J., Du Y., Li S.;
RT   "The genome of the cucumber, Cucumis sativus L.";
RL   Nat. Genet. 41:1275-1281(2009).
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DR   EMBL; CM002924; KGN59721.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A0A0LI38; -.
DR   STRING; 3659.A0A0A0LI38; -.
DR   EnsemblPlants; KGN59721; KGN59721; Csa_3G840960.
DR   Gramene; KGN59721; KGN59721; Csa_3G840960.
DR   eggNOG; ENOG502QVGP; Eukaryota.
DR   OMA; HNMTVAL; -.
DR   Proteomes; UP000029981; Chromosome 3.
DR   GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR   CDD; cd00065; FYVE_like_SF; 1.
DR   CDD; cd13365; PH_PLC_plant-like; 1.
DR   Gene3D; 2.30.29.30; Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB); 1.
DR   Gene3D; 2.130.10.30; Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II; 3.
DR   Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 1.
DR   InterPro; IPR013591; Brevis_radix_dom.
DR   InterPro; IPR027988; BRX_N.
DR   InterPro; IPR011993; PH-like_dom_sf.
DR   InterPro; IPR009091; RCC1/BLIP-II.
DR   InterPro; IPR000408; Reg_chr_condens.
DR   InterPro; IPR000306; Znf_FYVE.
DR   InterPro; IPR017455; Znf_FYVE-rel.
DR   InterPro; IPR011011; Znf_FYVE_PHD.
DR   InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR   PANTHER; PTHR22870; REGULATOR OF CHROMOSOME CONDENSATION; 1.
DR   PANTHER; PTHR22870:SF352; REGULATOR OF CHROMOSOME CONDENSATION (RCC1) FAMILY WITH FYVE ZINC FINGER DOMAIN-CONTAINING PROTEIN; 1.
DR   Pfam; PF08381; BRX; 1.
DR   Pfam; PF13713; BRX_N; 1.
DR   Pfam; PF01363; FYVE; 1.
DR   Pfam; PF00415; RCC1; 6.
DR   PRINTS; PR00633; RCCNDNSATION.
DR   SMART; SM00064; FYVE; 1.
DR   SUPFAM; SSF57903; FYVE/PHD zinc finger; 1.
DR   SUPFAM; SSF50729; PH domain-like; 1.
DR   SUPFAM; SSF50985; RCC1/BLIP-II; 1.
DR   PROSITE; PS51514; BRX; 1.
DR   PROSITE; PS00626; RCC1_2; 3.
DR   PROSITE; PS50012; RCC1_3; 6.
DR   PROSITE; PS50178; ZF_FYVE; 1.
PE   4: Predicted;
KW   Coiled coil {ECO:0000256|SAM:Coils};
KW   Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW   Reference proteome {ECO:0000313|Proteomes:UP000029981};
KW   Repeat {ECO:0000256|ARBA:ARBA00022737};
KW   Zinc {ECO:0000256|ARBA:ARBA00022833};
KW   Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW   ProRule:PRU00091}.
FT   REPEAT          333..384
FT                   /note="RCC1"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00235"
FT   REPEAT          385..439
FT                   /note="RCC1"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00235"
FT   REPEAT          440..491
FT                   /note="RCC1"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00235"
FT   REPEAT          502..553
FT                   /note="RCC1"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00235"
FT   REPEAT          554..605
FT                   /note="RCC1"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00235"
FT   REPEAT          606..657
FT                   /note="RCC1"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00235"
FT   DOMAIN          662..724
FT                   /note="FYVE-type"
FT                   /evidence="ECO:0000259|PROSITE:PS50178"
FT   DOMAIN          1035..1090
FT                   /note="BRX"
FT                   /evidence="ECO:0000259|PROSITE:PS51514"
FT   REGION          241..267
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          821..854
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          965..1034
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          1080..1123
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COILED          858..913
FT                   /evidence="ECO:0000256|SAM:Coils"
FT   COMPBIAS        241..266
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        821..845
FT                   /note="Pro residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        965..989
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        990..1004
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        1005..1034
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        1088..1123
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   1123 AA;  123158 MW;  A9C28B0D72CC11E9 CRC64;
     MNVDVDVSIE IISVIVVVVA TALPDAIVAC RHCCASSSCG FPTIFSDGMA DPASYGNHER
     DFEQALIALK KGTQLIKYSR KGKPKLCPFR ISTDETTLIW YSHGEERTLK LSSISRIIPG
     QRTAVFRRYL RPEKDYLSFS LLYRNGERSL DLICKDKGEA EVWFLGLKNL ISPRQHHGRS
     RSDFSDVQDA NEFFQSSRPF GATLEFSNSL ARGRDSIDLN SRESHLHLVS SDVGSERANM
     QLRTSGGDGF RSSVSSTPSC SSGGSGPDDI ESLGDVYVWG EIWTDLVLPD GTSSQIPVKN
     DVLTPKPLET NVVLDVQQIA CGVRHIALVT RQGEVFTWGE ECGGRLGHGI DRDFSRPHLV
     EFLAVSHVDF VACGEYHTCA ITSSNDLYTW GDGIFNSGIL GHGTDISHWI PKRVVGSLEG
     LQVLSVACGT WHSALATSNG KLYTFGDGTY GVLGHGDRES VVYPREVQLL SGLRTIKVAC
     GVWHTAAIVE VMSQTGSNMS SRKLFTWGDG DKYRLGHGNK ETYLLPTCVS SLIDYNFHQL
     ACGHNMTVAL TTSGHVFTMG GTAYGQLGNP SSDGVIPCLV QDRLVGEFVE EISCGAYHTV
     VLTSRNEVFS WGRGSNGRLG HGDVEDRKAP TLIEALKDRH VKSISCGSNF TASICIHKWV
     SGADQSVCTG CRQAFGFTRK RHNCYNCGLV HCHSCSSKKA LKAALAPTPG KPHRVCDSCY
     AKLKSAEAGN NFCVNRKLTA NRRSTDYKER FDRGDVRPSR ILLSPTTEPV KYHEIKSVRP
     GSRPTSPSMV RASQVPSLQQ LKDIAFPSSL SAIQNALRPA LVAPPSPPPM GNSRPASPYA
     RRPSPPRSTT PVFSKSVIDS LKKSNETLVQ DKSKLQREVK NLKQKCDIQG AEIQNLQKNA
     TEAASLVEEE SSKCKIAKKL VTTITEQLKE MKDKLPPEIW DGENFKSMYA QAEAFLNMVE
     TSKTSSLPTS HEKTNNLTAL NNGSTPSLDD SSKRIEDDGS GRKDLTQENV NSLLESKKTS
     ENGSRSPLSS TEGEKQVIEQ FEPGVYATLV VLSNGTKIFK RVRFSKRRFD EQQAEDWWSK
     NKDRLLKRYN PSTSTSSSTP TGSPKTQPVS STEESNEIPS APP
//
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