ID A0A0A1I0U1_9PSED Unreviewed; 616 AA.
AC A0A0A1I0U1;
DT 04-FEB-2015, integrated into UniProtKB/TrEMBL.
DT 04-FEB-2015, sequence version 1.
DT 27-MAR-2024, entry version 48.
DE SubName: Full=Sigma-54 dependent transcriptional regulator {ECO:0000313|EMBL:CDF96131.1};
GN ORFNames=BN844_1153 {ECO:0000313|EMBL:CDF96131.1};
OS Pseudomonas sp. SHC52.
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales;
OC Pseudomonadaceae; Pseudomonas.
OX NCBI_TaxID=984195 {ECO:0000313|EMBL:CDF96131.1, ECO:0000313|Proteomes:UP000031550};
RN [1] {ECO:0000313|EMBL:CDF96131.1, ECO:0000313|Proteomes:UP000031550}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=SHC52 {ECO:0000313|EMBL:CDF96131.1,
RC ECO:0000313|Proteomes:UP000031550};
RA Van der Voort M., Mendes R., Raaijmakers J.M.;
RT "Genome mining of the rhizosphere bacterium Pseudomonas sp. SH-C52.";
RL Submitted (MAY-2013) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:CDF96131.1}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; CBLV010000305; CDF96131.1; -; Genomic_DNA.
DR RefSeq; WP_041023713.1; NZ_CBLV010000305.1.
DR AlphaFoldDB; A0A0A1I0U1; -.
DR OrthoDB; 9804019at2; -.
DR Proteomes; UP000031550; Unassembled WGS sequence.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd00009; AAA; 1.
DR Gene3D; 1.10.8.60; -; 1.
DR Gene3D; 3.30.450.40; -; 1.
DR Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR InterPro; IPR003593; AAA+_ATPase.
DR InterPro; IPR003018; GAF.
DR InterPro; IPR029016; GAF-like_dom_sf.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR002197; HTH_Fis.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR002078; Sigma_54_int.
DR InterPro; IPR025662; Sigma_54_int_dom_ATP-bd_1.
DR PANTHER; PTHR32071; TRANSCRIPTIONAL REGULATORY PROTEIN; 1.
DR PANTHER; PTHR32071:SF77; TRANSCRIPTIONAL REGULATORY PROTEIN GLRR; 1.
DR Pfam; PF01590; GAF; 1.
DR Pfam; PF02954; HTH_8; 1.
DR Pfam; PF00158; Sigma54_activat; 1.
DR PRINTS; PR01590; HTHFIS.
DR SMART; SM00382; AAA; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR PROSITE; PS00675; SIGMA54_INTERACT_1; 1.
DR PROSITE; PS50045; SIGMA54_INTERACT_4; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 314..541
FT /note="Sigma-54 factor interaction"
FT /evidence="ECO:0000259|PROSITE:PS50045"
SQ SEQUENCE 616 AA; 68592 MW; 848034789F3E1AEF CRC64;
MAAPAPALSH DAIIQASWSR CRAFGLNHQS APTFDPLPAE GIAQLLESQH SLVQTTHQEV
LPYYENILSN SNCLIMLADN QGQVLTSWGT QRFIEPKLAH GFSAGASWME RCTGTNAIGT
ALACEQAVHI EHDEHFLKAN RFMTGSAAPI FDAERKVIAV LDVSSDSYLP PSHTLGMVKM
MSQTVENRLI LNLFRGEHFQ LIFNTGLNNL DSQWAGLLIF DESGQVLSAN RRADNLLGLS
LSRVSIESLF KVSLLELLNQ PDGLPFSLQA AGRNRFQCML KRPNQVSVKP RVFTEPAPSP
APAPASHVIS LSTLHFGDSR VEKAVRQAER LLEKDIPLLI HGETGVGKEV FVKALHQASS
RCKQPFIAVN CAAIPAELVE SELFGYEKGA FTGANQKGSI GLIRKADRGT LFLDEIGDMP
LPTQARLLRV LQERCVQPVG SAELFPVDIR IISATNRSLR EQVQLGRFRE DLYYRIGGLT
LELPPLRERS DKQALFKRLW EHHREPTQWA GLSREVLELF ERHPWPGNLR QVSSVLQVAL
AMAEEQPIRP EHLPDDFFVD LEMDPVDSPE PLSVDLNDAE DLNRQLQAVG GNISHLARRL
GVSRNTLYKR LRQLEN
//
