ID A0A0A1YF18_9PSED Unreviewed; 485 AA.
AC A0A0A1YF18;
DT 04-FEB-2015, integrated into UniProtKB/TrEMBL.
DT 04-FEB-2015, sequence version 1.
DT 24-JAN-2024, entry version 31.
DE SubName: Full=Ribonuclease G {ECO:0000313|EMBL:KFX68445.1};
GN ORFNames=TMS3_0119580 {ECO:0000313|EMBL:KFX68445.1};
OS Pseudomonas taeanensis MS-3.
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales;
OC Pseudomonadaceae; Pseudomonas.
OX NCBI_TaxID=1395571 {ECO:0000313|EMBL:KFX68445.1, ECO:0000313|Proteomes:UP000030063};
RN [1] {ECO:0000313|EMBL:KFX68445.1, ECO:0000313|Proteomes:UP000030063}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=MS-3 {ECO:0000313|EMBL:KFX68445.1,
RC ECO:0000313|Proteomes:UP000030063};
RX PubMed=24407626;
RA Lee S.Y., Kim S.H., Lee D.G., Shin S., Yun S.H., Choi C.W., Chung Y.H.,
RA Choi J.S., Kahng H.Y., Kim S.I.;
RT "Draft Genome Sequence of Petroleum Oil-Degrading Marine Bacterium
RT Pseudomonas taeanensis Strain MS-3, Isolated from a Crude Oil-Contaminated
RT Seashore.";
RL Genome Announc. 2:0-0(2014).
CC -!- COFACTOR:
CC Name=Mg(2+); Xref=ChEBI:CHEBI:18420;
CC Evidence={ECO:0000256|ARBA:ARBA00001946};
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KFX68445.1}.
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DR EMBL; AWSQ01000006; KFX68445.1; -; Genomic_DNA.
DR RefSeq; WP_025166896.1; NZ_AWSQ01000006.1.
DR AlphaFoldDB; A0A0A1YF18; -.
DR STRING; 1395571.TMS3_0119580; -.
DR eggNOG; COG1530; Bacteria.
DR OrthoDB; 9804278at2; -.
DR Proteomes; UP000030063; Unassembled WGS sequence.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR GO; GO:0004540; F:RNA nuclease activity; IEA:InterPro.
DR GO; GO:0006396; P:RNA processing; IEA:InterPro.
DR CDD; cd04453; S1_RNase_E; 1.
DR Gene3D; 2.40.50.140; Nucleic acid-binding proteins; 1.
DR Gene3D; 3.40.1260.20; Ribonuclease E, catalytic domain; 1.
DR InterPro; IPR012340; NA-bd_OB-fold.
DR InterPro; IPR019307; RNA-bd_AU-1/RNase_E/G.
DR InterPro; IPR004659; RNase_E/G.
DR InterPro; IPR003029; S1_domain.
DR NCBIfam; TIGR00757; RNaseEG; 1.
DR PANTHER; PTHR30001; RIBONUCLEASE; 1.
DR PANTHER; PTHR30001:SF0; RIBONUCLEASE G; 1.
DR Pfam; PF10150; RNase_E_G; 1.
DR Pfam; PF00575; S1; 1.
DR SMART; SM00316; S1; 1.
DR SUPFAM; SSF50249; Nucleic acid-binding proteins; 1.
DR PROSITE; PS50126; S1; 1.
PE 4: Predicted;
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Magnesium {ECO:0000256|ARBA:ARBA00022842};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Reference proteome {ECO:0000313|Proteomes:UP000030063};
KW RNA-binding {ECO:0000256|ARBA:ARBA00022884}.
FT DOMAIN 39..113
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
SQ SEQUENCE 485 AA; 54412 MW; D9ADEDE537B1773D CRC64;
MSEEILINIT PMESRVAVVE NGVLQEVHVE RTQRRGIVGN IYKGKVVRVL PGMQAAFVDI
GLERAAFIHA SEISSREGSA VESISALVHE GQALVVQVTK DPIGSKGARL TTQLSIPSRY
LVYMPRTSHV GISLRIEDEG ERERLKQVVA DCVEAEGIEE AGGFILRTAA DGAGAEEILI
DIRYLRRLWE QIGGQIQAAP APSVIYEDLS LALRTLRDLV SLRTEKIRVD SRETFQKITQ
FGAELMPEIA GRLEHYPGER PVFDLYGVED EIQKALERKV PLKSGGYLII DPAEAMSTID
VNTGAFVGHR TLEETIFKTN LEAATAIARQ LRLRNLGGII IIDFIDMEDE EHQRQVLRTL
EKQLERDHAK TNIIGITELG LVQMTRKRTR ESLEQILCEP CVCCQGRGKL KTPETICYDI
FREILREARA YQAEGYRVLA NQKVVDRLLD EESGNVADLE AFIGRTIKFQ VETMYSQEQY
DVVLL
//
