ID A0A0B0NMS9_GOSAR Unreviewed; 1760 AA.
AC A0A0B0NMS9;
DT 04-MAR-2015, integrated into UniProtKB/TrEMBL.
DT 04-MAR-2015, sequence version 1.
DT 27-MAR-2024, entry version 52.
DE RecName: Full=RNA helicase {ECO:0000256|ARBA:ARBA00012552};
DE EC=3.6.4.13 {ECO:0000256|ARBA:ARBA00012552};
GN ORFNames=F383_07330 {ECO:0000313|EMBL:KHG13119.1};
OS Gossypium arboreum (Tree cotton) (Gossypium nanking).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium.
OX NCBI_TaxID=29729 {ECO:0000313|EMBL:KHG13119.1, ECO:0000313|Proteomes:UP000032142};
RN [1] {ECO:0000313|Proteomes:UP000032142}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=cv. AKA8401 {ECO:0000313|Proteomes:UP000032142};
RA Mudge J., Ramaraj T., Lindquist I.E., Bharti A.K., Sundararajan A.,
RA Cameron C.T., Woodward J.E., May G.D., Brubaker C., Broadhvest J.,
RA Wilkins T.A.;
RL Submitted (SEP-2014) to the EMBL/GenBank/DDBJ databases.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=ATP + H2O = ADP + H(+) + phosphate; Xref=Rhea:RHEA:13065,
CC ChEBI:CHEBI:15377, ChEBI:CHEBI:15378, ChEBI:CHEBI:30616,
CC ChEBI:CHEBI:43474, ChEBI:CHEBI:456216; EC=3.6.4.13;
CC Evidence={ECO:0000256|ARBA:ARBA00001556};
CC -!- SIMILARITY: Belongs to the DEAD box helicase family. DEAH subfamily.
CC {ECO:0000256|ARBA:ARBA00008792}.
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DR EMBL; KN398936; KHG13119.1; -; Genomic_DNA.
DR RefSeq; XP_017649300.1; XM_017793811.1.
DR SMR; A0A0B0NMS9; -.
DR GeneID; 108489338; -.
DR KEGG; gab:108489338; -.
DR OMA; NHPGRRK; -.
DR OrthoDB; 443445at2759; -.
DR Proteomes; UP000032142; Unassembled WGS sequence.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016787; F:hydrolase activity; IEA:UniProtKB-KW.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0003724; F:RNA helicase activity; IEA:UniProtKB-EC.
DR GO; GO:0016740; F:transferase activity; IEA:UniProtKB-KW.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR CDD; cd20335; BRcat_RBR; 1.
DR CDD; cd17917; DEXHc_RHA-like; 1.
DR CDD; cd22585; Rcat_RBR_DEAH12-like; 1.
DR CDD; cd18791; SF2_C_RHA; 1.
DR Gene3D; 1.20.120.1750; -; 1.
DR Gene3D; 1.10.10.2130; DEAH helicase family, winged-helix domain; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 2.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 1.
DR InterPro; IPR011709; DEAD-box_helicase_OB_fold.
DR InterPro; IPR011545; DEAD/DEAH_box_helicase_dom.
DR InterPro; IPR042035; DEAH_win-hel_dom.
DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS.
DR InterPro; IPR007502; Helicase-assoc_dom.
DR InterPro; IPR014001; Helicase_ATP-bd.
DR InterPro; IPR001650; Helicase_C.
DR InterPro; IPR002867; IBR_dom.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR044066; TRIAD_supradom.
DR InterPro; IPR013087; Znf_C2H2_type.
DR InterPro; IPR001841; Znf_RING.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR InterPro; IPR017907; Znf_RING_CS.
DR PANTHER; PTHR18934; ATP-DEPENDENT RNA HELICASE; 1.
DR PANTHER; PTHR18934:SF81; ATP-DEPENDENT RNA HELICASE DEAH11, CHLOROPLASTIC-RELATED; 1.
DR Pfam; PF00270; DEAD; 1.
DR Pfam; PF00271; Helicase_C; 1.
DR Pfam; PF01485; IBR; 1.
DR Pfam; PF07717; OB_NTP_bind; 1.
DR SMART; SM00487; DEXDc; 1.
DR SMART; SM00847; HA2; 1.
DR SMART; SM00490; HELICc; 1.
DR SMART; SM00647; IBR; 2.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR SUPFAM; SSF57850; RING/U-box; 3.
DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1.
DR PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR PROSITE; PS51194; HELICASE_CTER; 1.
DR PROSITE; PS51873; TRIAD; 1.
DR PROSITE; PS00518; ZF_RING_1; 1.
DR PROSITE; PS50089; ZF_RING_2; 1.
DR PROSITE; PS00028; ZINC_FINGER_C2H2_1; 1.
PE 3: Inferred from homology;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Reference proteome {ECO:0000313|Proteomes:UP000032142};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Transferase {ECO:0000256|ARBA:ARBA00022679};
KW Ubl conjugation pathway {ECO:0000256|ARBA:ARBA00022786};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771}.
SQ SEQUENCE 1760 AA; 198010 MW; 3F0AD56C9826F86E CRC64;
MKNFSSSSNH RHPPPPGGHK PYPHRQHQQS SYQNNFRCVP NFQAVNKKYY RRRFPPPAST
TDGSVNSNAL HCPNFIIQLV HDFSSSPSKP DDLQTLISQL DPSPQNSHIY TTGKIAASLI
FQEWSKTLSS IIHLWRSRLD GSIHYTPKLI SNVIVPSDTV ELNQNLKTLF SSHITGLMEG
ALVRKWQEKI NEKSDEIADL VGQMGKRKYS LGMFYELDDK KKALKAERST ISKRLKEFKG
GMSSLLRCLE TWEIGNEEGD EGVKVYRVEG ELDWKLIHQL ILRECRRLED GLPIYAYRQE
ILTRIHGQQV MVLIGETGSG KSTQLVQFLS DSGIAANESI VCTQPRKIAA ISLAKRVREE
SIGCYSDNSV ICYPTFSSSQ QFDSKVIYMT DHCLLQHYMK DKNLSGISCI IVDEAHERSL
NTDLLLALVK DLLGRRFDLR LVIMSATANA NQLSDYFFGC GIFHLEGRNF PVDIKYVPCA
TEGTSGSGMV ATYVSDVLRM AAEIHKTEKE GNILAFLTSQ MEVEWACDHF EAPNAIVLPL
HGKLSFEEQC HVFQNYPGKR KIVFATNIAE TSLTIPGVKY VIDSGMVKES KFEPGTGMNV
LEVCWISQSS ANQRAGRAGR TEPGRCYRLY TENDFELMTS NQEPEIRRVH LGIAVLRILA
LGIKNIQTFD FVDAPSSKAI DSATRNLIQL GAIVEKNGVF ELTDEGQYLV KLGIEPRLGK
LIISCFHCGL RREGLVLAAV MANASSIFCR VGNDDDKVKA DCLKVQFCHQ NGDLFTLLSV
YKEWEALPFD RKNKWCWENS INAKSMRRCQ DTVTELEICL KKELAVIIPS YLIWDPHKST
ERDKTLKAII LSSLAENVAM YCGHDQLGYE VALTGQYVQL HPSCSLLIFG QKPSWVVFSE
LLSVTKQYLV CVTTFDYESL ATLDPPPLFD ASQMESRKLQ VKALTGFGST LLKKFCGKSN
HNIRSLSSRI KTICKDERIG VEVNVDQNEI LLFASSVDMQ KVLDFVTDVL ECEKKWLHNE
CMEKPLFHGR SASPSMALFG AGAEIKHLEV DKRYLAVDVF HSNLNAIDDK ELLMFFEKHS
NGGICSAHKS QANGQEIDDK EKWGKIIFLT PDAARKASEL DGVDFSGSAL KVLPSQTSFG
GDHKMFSFPP VKAKLSWPRR LSKGIGIVKC DRLDVQNILY DFSSRLVIAG KYVNCEVSRK
CDDSVLIYGI DKELSEAEVR DILHSATERE IHDFFLVRGD AVENPTCGAC EEALWREISP
FMPKGNPYTN CCWVQVFEPE PKETFMKALI TFDGRLHLEA AKALEQLEGK VLPGCLSWQK
IRCQQLFHSS ISCSSFVYAV IKKQLDSLLA SFRHVKGADC FLETNENGSC RVRISANATK
TVAELRRPLE ELMNGRTVKH ASLTPSILQH LISRDGINLM RSLQRETRTY ILFNRHSLNI
RIFGSRDDAA VAQQKLMQSL LSYHESKQLE VRLRGRGLPP DMMKEVVKKF GPDLHGLKEK
IPGAEFTLNT RHHIISICGN KEMKQKVEEI VLQIAEAGRD LAVRSDSEVS CPICLCEVED
GYRLEGCSHF FCRSCLLKQC ESAIKNLDSF PLCCAQQGCK APILLTDLKS LLSTEKLEEL
FRASLGAFVV SSGGAYRFCP SPDCPSVYRV AGPETFGEPF VCGACYAETC TRCHLEYHPY
LSCEKYREFK EDPDLSLKEW CKGKEQVKTC PVCGYTIEKI DGCNHVECKC GRHVCWVCLE
FFSSSDDCYG HLRAVHMAII
//
