ID A0A0B0P0L6_GOSAR Unreviewed; 578 AA.
AC A0A0B0P0L6;
DT 04-MAR-2015, integrated into UniProtKB/TrEMBL.
DT 04-MAR-2015, sequence version 1.
DT 27-MAR-2024, entry version 48.
DE RecName: Full=RNA polymerase sigma factor {ECO:0000256|PIRNR:PIRNR000767};
GN ORFNames=F383_08563 {ECO:0000313|EMBL:KHG18437.1};
OS Gossypium arboreum (Tree cotton) (Gossypium nanking).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium.
OX NCBI_TaxID=29729 {ECO:0000313|EMBL:KHG18437.1, ECO:0000313|Proteomes:UP000032142};
RN [1] {ECO:0000313|Proteomes:UP000032142}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=cv. AKA8401 {ECO:0000313|Proteomes:UP000032142};
RA Mudge J., Ramaraj T., Lindquist I.E., Bharti A.K., Sundararajan A.,
RA Cameron C.T., Woodward J.E., May G.D., Brubaker C., Broadhvest J.,
RA Wilkins T.A.;
RL Submitted (SEP-2014) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Sigma factors are initiation factors that promote the
CC attachment of plastid-encoded RNA polymerase (PEP) to specific
CC initiation sites and are then released.
CC {ECO:0000256|PIRNR:PIRNR000767}.
CC -!- SUBCELLULAR LOCATION: Plastid, chloroplast
CC {ECO:0000256|PIRNR:PIRNR000767}.
CC -!- SIMILARITY: Belongs to the sigma-70 factor family.
CC {ECO:0000256|ARBA:ARBA00007788, ECO:0000256|PIRNR:PIRNR000767}.
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DR EMBL; KN410613; KHG18437.1; -; Genomic_DNA.
DR RefSeq; XP_017627350.1; XM_017771861.1.
DR AlphaFoldDB; A0A0B0P0L6; -.
DR SMR; A0A0B0P0L6; -.
DR GeneID; 108470516; -.
DR KEGG; gab:108470516; -.
DR OMA; CAELNGS; -.
DR OrthoDB; 33789at2759; -.
DR Proteomes; UP000032142; Unassembled WGS sequence.
DR GO; GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0016987; F:sigma factor activity; IEA:UniProtKB-UniRule.
DR GO; GO:0071482; P:cellular response to light stimulus; IEA:UniProt.
DR GO; GO:0006352; P:DNA-templated transcription initiation; IEA:UniProtKB-UniRule.
DR CDD; cd06171; Sigma70_r4; 1.
DR Gene3D; 1.10.601.10; RNA Polymerase Primary Sigma Factor; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 2.
DR InterPro; IPR014284; RNA_pol_sigma-70_dom.
DR InterPro; IPR000943; RNA_pol_sigma70.
DR InterPro; IPR007627; RNA_pol_sigma70_r2.
DR InterPro; IPR007624; RNA_pol_sigma70_r3.
DR InterPro; IPR007630; RNA_pol_sigma70_r4.
DR InterPro; IPR013325; RNA_pol_sigma_r2.
DR InterPro; IPR013324; RNA_pol_sigma_r3/r4-like.
DR InterPro; IPR016262; RNA_pol_sigma_SigB/C/D/F.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR NCBIfam; TIGR02937; sigma70-ECF; 1.
DR PANTHER; PTHR30603; RNA POLYMERASE SIGMA FACTOR RPO; 1.
DR PANTHER; PTHR30603:SF57; RNA POLYMERASE SIGMA FACTOR SIGB; 1.
DR Pfam; PF04542; Sigma70_r2; 1.
DR Pfam; PF04539; Sigma70_r3; 1.
DR Pfam; PF04545; Sigma70_r4; 1.
DR PIRSF; PIRSF000767; RNA_pol_sigma_SigB/C/D; 1.
DR PRINTS; PR00046; SIGMA70FCT.
DR SUPFAM; SSF88946; Sigma2 domain of RNA polymerase sigma factors; 1.
DR SUPFAM; SSF88659; Sigma3 and sigma4 domains of RNA polymerase sigma factors; 2.
DR PROSITE; PS00716; SIGMA70_2; 1.
PE 3: Inferred from homology;
KW Chloroplast {ECO:0000256|PIRNR:PIRNR000767};
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125, ECO:0000256|PIRNR:PIRNR000767};
KW Plastid {ECO:0000256|PIRNR:PIRNR000767};
KW Reference proteome {ECO:0000313|Proteomes:UP000032142};
KW Sigma factor {ECO:0000256|ARBA:ARBA00023082,
KW ECO:0000256|PIRNR:PIRNR000767};
KW Transcription {ECO:0000256|ARBA:ARBA00023163,
KW ECO:0000256|PIRNR:PIRNR000767};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015,
KW ECO:0000256|PIRNR:PIRNR000767}.
SQ SEQUENCE 578 AA; 64717 MW; 278580AF088D524C CRC64;
MSCLLPQFKC QPDTFSIQFR AHHSHHSKHK ESICFRSQCV LSTTSSTSTA TTAVLDVEKL
RLPSFEAHSN SVVTDRPWTY TGATGPPSEA SFGATLATEN LLTSDEAVIA AAAAEAVALA
RAAAKVAKDA AIMVKNHSSA KTEMKSPGSS ATDTLTSKWG LFTEAERAGI VGDYVSDELE
MEEDDFEQNS TKESDELEPT NEELKLLEEQ LSRSIAVRSN RQPERKAKRT RAAEKAATNV
VSVKSGSTNR KRRGALQDID YSDPLRYLRG TTNTSKLLTA NEELELSEGI QDLLKLEVLH
EELAERCGRP PTFAQWAAAA EVDRKTLRER LNYGTICKDK MIKSNIRLVI SIAKNYQGAG
MNLQDLVQEG CRGLIRGAEK FDASKGFKFS TYAHWWIKQA VRKSLSDQSR TIRLPFHMVE
ATYRVKEARK QLYSENGRQP DNIEVAEATG LSMKRLTAVL LAPKAPRSLD QKIGINQNLK
PSEVIADPEA DSAEDILLKQ FMKKDLEKVL DSLSPRERQV IRWRFGMEDG RMKTLQEIGE
SMGVSRERIR QIELCAFRKL KNKRRTKHLQ QYLLSYAS
//
