ID A0A0B5DIH3_9ACTN Unreviewed; 342 AA.
AC A0A0B5DIH3;
DT 01-APR-2015, integrated into UniProtKB/TrEMBL.
DT 01-APR-2015, sequence version 1.
DT 27-MAR-2024, entry version 29.
DE SubName: Full=ATP-dependent DNA ligase {ECO:0000313|EMBL:AJE43518.1};
DE SubName: Full=DNA ligase D {ECO:0000313|EMBL:MBB4794991.1};
GN ORFNames=BJY54_005603 {ECO:0000313|EMBL:MBB4794991.1}, CP978_28755
GN {ECO:0000313|EMBL:QEV42022.1}, SNOD_28485
GN {ECO:0000313|EMBL:AJE43518.1};
OS Streptomyces nodosus.
OC Bacteria; Actinomycetota; Actinomycetes; Kitasatosporales;
OC Streptomycetaceae; Streptomyces.
OX NCBI_TaxID=40318 {ECO:0000313|EMBL:AJE43518.1, ECO:0000313|Proteomes:UP000031526};
RN [1] {ECO:0000313|Proteomes:UP000031526}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 14899 {ECO:0000313|Proteomes:UP000031526};
RA Sweeney P., Stephens N., Murphy C., Caffrey P.;
RT "Sequence of the Streptomyces nodosus genome.";
RL Submitted (SEP-2014) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:AJE43518.1, ECO:0000313|Proteomes:UP000031526}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 14899 {ECO:0000313|EMBL:AJE43518.1,
RC ECO:0000313|Proteomes:UP000031526};
RX PubMed=26497174;
RA Sweeney P., Murphy C.D., Caffrey P.;
RT "Exploiting the genome sequence of Streptomyces nodosus for enhanced
RT antibiotic production.";
RL Appl. Microbiol. Biotechnol. 100:1285-1295(2016).
RN [3] {ECO:0000313|EMBL:QEV42022.1, ECO:0000313|Proteomes:UP000325763}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 14899 {ECO:0000313|EMBL:QEV42022.1,
RC ECO:0000313|Proteomes:UP000325763};
RA Lee N., Cho B.-K.;
RT "Streptomyces genome completion.";
RL Submitted (SEP-2017) to the EMBL/GenBank/DDBJ databases.
RN [4] {ECO:0000313|EMBL:MBB4794991.1, ECO:0000313|Proteomes:UP000544950}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 40109 {ECO:0000313|EMBL:MBB4794991.1,
RC ECO:0000313|Proteomes:UP000544950};
RA Klenk H.-P.;
RT "Sequencing the genomes of 1000 actinobacteria strains.";
RL Submitted (AUG-2020) to the EMBL/GenBank/DDBJ databases.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; CP009313; AJE43518.1; -; Genomic_DNA.
DR EMBL; JACHMR010000001; MBB4794991.1; -; Genomic_DNA.
DR EMBL; CP023747; QEV42022.1; -; Genomic_DNA.
DR RefSeq; WP_043445586.1; NZ_JACHMR010000001.1.
DR STRING; 40318.SNOD_28485; -.
DR KEGG; snq:CP978_28755; -.
DR HOGENOM; CLU_008325_1_0_11; -.
DR OrthoDB; 4296267at2; -.
DR Proteomes; UP000031526; Chromosome.
DR Proteomes; UP000325763; Chromosome.
DR Proteomes; UP000544950; Unassembled WGS sequence.
DR GO; GO:0016874; F:ligase activity; IEA:UniProtKB-KW.
DR CDD; cd04865; LigD_Pol_like_2; 1.
DR Gene3D; 3.90.920.10; DNA primase, PRIM domain; 1.
DR InterPro; IPR014145; LigD_pol_dom.
DR NCBIfam; TIGR02778; ligD_pol; 1.
DR PANTHER; PTHR42705:SF3; -; 1.
DR PANTHER; PTHR42705; BIFUNCTIONAL NON-HOMOLOGOUS END JOINING PROTEIN LIGD; 1.
DR Pfam; PF21686; LigD_Prim-Pol; 1.
PE 4: Predicted;
KW Ligase {ECO:0000313|EMBL:AJE43518.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000031526}.
FT DOMAIN 30..282
FT /note="DNA ligase D polymerase"
FT /evidence="ECO:0000259|Pfam:PF21686"
FT REGION 305..342
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 327..342
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 342 AA; 38683 MW; 946266C19702EA56 CRC64;
MGDAVELEAG GRTVRLSSPD KVFFPERGFT KLDLARYYLA VGPGILRALR DRPTTLERHP
DGVTGESFFQ KRAPRHMPDW IPTAHITFPS GRSADEMCPT EIAAVVWAAQ YGTLTFHPWP
VRRDDVDRPD ELRIDLDPQP GTGFVDAVRA AHELRSVLDE FGGLRGWPKT SGGRGLHVFV
PIEPRWTFTQ VRRAAIAVGR ELERRMPRDV TIAWWKEERG EKIFVDYNQT ARDRTIASAY
SVRPRPQAPV SAPLRWEEVD EVTPGDFDLA TMPRRFAELG DVHADMDDHA FSLEALLDLA
RRDEHDHGLG DLPYPPEYPK MPGEPKRVQP SRARREGKPE AG
//
