ID A0A0C9XQD7_9AGAR Unreviewed; 765 AA.
AC A0A0C9XQD7;
DT 29-APR-2015, integrated into UniProtKB/TrEMBL.
DT 29-APR-2015, sequence version 1.
DT 13-SEP-2023, entry version 27.
DE RecName: Full=Splicing factor 3A subunit 1 {ECO:0008006|Google:ProtNLM};
GN ORFNames=K443DRAFT_94470 {ECO:0000313|EMBL:KIK03844.1};
OS Laccaria amethystina LaAM-08-1.
OC Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Agaricomycetes;
OC Agaricomycetidae; Agaricales; Agaricineae; Hydnangiaceae; Laccaria.
OX NCBI_TaxID=1095629 {ECO:0000313|EMBL:KIK03844.1, ECO:0000313|Proteomes:UP000054477};
RN [1] {ECO:0000313|EMBL:KIK03844.1, ECO:0000313|Proteomes:UP000054477}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=LaAM-08-1 {ECO:0000313|EMBL:KIK03844.1,
RC ECO:0000313|Proteomes:UP000054477};
RG DOE Joint Genome Institute;
RA Kuo A., Kohler A., Nagy L.G., Floudas D., Copeland A., Barry K.W.,
RA Cichocki N., Veneault-Fourrey C., LaButti K., Lindquist E.A., Lipzen A.,
RA Lundell T., Morin E., Murat C., Sun H., Tunlid A., Henrissat B.,
RA Grigoriev I.V., Hibbett D.S., Martin F., Nordberg H.P., Cantor M.N.,
RA Hua S.X.;
RL Submitted (APR-2014) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|Proteomes:UP000054477}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=LaAM-08-1 {ECO:0000313|Proteomes:UP000054477};
RG DOE Joint Genome Institute;
RG Mycorrhizal Genomics Consortium;
RA Kohler A., Kuo A., Nagy L.G., Floudas D., Copeland A., Barry K.W.,
RA Cichocki N., Veneault-Fourrey C., LaButti K., Lindquist E.A., Lipzen A.,
RA Lundell T., Morin E., Murat C., Riley R., Ohm R., Sun H., Tunlid A.,
RA Henrissat B., Grigoriev I.V., Hibbett D.S., Martin F.;
RT "Evolutionary Origins and Diversification of the Mycorrhizal Mutualists.";
RL Submitted (JAN-2015) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
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DR EMBL; KN838576; KIK03844.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A0C9XQD7; -.
DR STRING; 1095629.A0A0C9XQD7; -.
DR HOGENOM; CLU_013259_1_0_1; -.
DR OrthoDB; 168687at2759; -.
DR Proteomes; UP000054477; Unassembled WGS sequence.
DR GO; GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
DR GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR GO; GO:0045292; P:mRNA cis splicing, via spliceosome; IEA:InterPro.
DR Gene3D; 1.10.10.790; Surp module; 2.
DR InterPro; IPR045146; SF3A1.
DR InterPro; IPR022030; SF3A1_dom.
DR InterPro; IPR000061; Surp.
DR InterPro; IPR035967; SWAP/Surp_sf.
DR InterPro; IPR000626; Ubiquitin-like_dom.
DR InterPro; IPR029071; Ubiquitin-like_domsf.
DR PANTHER; PTHR15316; SPLICEOSOME ASSOCIATED PROTEIN 114/SWAP SPLICING FACTOR-RELATED; 1.
DR PANTHER; PTHR15316:SF1; SPLICING FACTOR 3A SUBUNIT 1; 1.
DR Pfam; PF12230; PRP21_like_P; 1.
DR Pfam; PF01805; Surp; 2.
DR Pfam; PF00240; ubiquitin; 1.
DR SMART; SM00648; SWAP; 2.
DR SUPFAM; SSF109905; Surp module (SWAP domain); 2.
DR SUPFAM; SSF54236; Ubiquitin-like; 1.
DR PROSITE; PS50128; SURP; 2.
DR PROSITE; PS50053; UBIQUITIN_2; 1.
PE 4: Predicted;
KW mRNA processing {ECO:0000256|ARBA:ARBA00022664};
KW mRNA splicing {ECO:0000256|ARBA:ARBA00023187};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000054477};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Spliceosome {ECO:0000256|ARBA:ARBA00022728}.
FT DOMAIN 39..83
FT /note="SURP motif"
FT /evidence="ECO:0000259|PROSITE:PS50128"
FT DOMAIN 141..183
FT /note="SURP motif"
FT /evidence="ECO:0000259|PROSITE:PS50128"
FT DOMAIN 709..764
FT /note="Ubiquitin-like"
FT /evidence="ECO:0000259|PROSITE:PS50053"
FT REGION 93..115
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 322..372
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 93..111
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 340..359
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 765 AA; 84832 MW; 2DCC2B4A091E4B02 CRC64;
MNGAHFNGDV DYDMHGMHRD GPIRFTSGLI LPPPEIKSVI DRTALFVARS ANPPQFEDKI
REGQRSDPKF SFLNPADPYH GYYRHKMDKI AQGDLGDDPE MKDEKGEGDS APKQVVDIGV
EPPQPAFIME MPHISSIDLE IMKVTALFTA RRGRIFLANL SAREGRNYQF DFLRPTHSLF
GYFNRLVEQY TKVLHPDKET LEQLKQRAQK GARWQTLEFA RKYGKWERNK REKNKKREDD
QEAERIAFAE IDWHDYAIVQ TIEFTAADAN SELPPPMSVQ EVENMTLAQK RMAAMIMENT
AEDIEAHRAK QAAAEAEAAA AVGGAGIGGE DNAAMEESDD EEDRAAKKRQ DEEARQREYA
RAQAIQASSV NTAGPMKIRT DYVPKLGAKN AKGAMTTCTI CGQQIAVDEL QEHMRIELLD
PKWKEQRDAL EARKAQASEL QRGANVVSSL KNLARTRVDI FGTETDEERR KREEEEERER
RKEREKVVWD GHTASKANTL DKFSTNVNFD EQIAAIHRAK GLGPQETNAI GPGIGPAAAP
PPLATLPPAP ASLPAPPQAA GSGAYSAATI SSGPQPASAY SQPPVMLPPL HYQGLDAAQP
FGYQPPASGM HPSRMAALAA ANGSMQSAQT GMVRSADEME GGVNELPPAK RQRVAKLPGG
NLYPEEDWIA MHPYPISLLV QLPNDPTKPE WKLDGKIVSI PDLPLNLLVS TLRDRILQHT
DSSVPASRIR ISYQGKMLTN SSTIASYNLE DEDLLLFSVR DPKKK
//
