ID A0A0D2L9S3_9CHLO Unreviewed; 287 AA.
AC A0A0D2L9S3;
DT 29-APR-2015, integrated into UniProtKB/TrEMBL.
DT 29-APR-2015, sequence version 1.
DT 13-SEP-2023, entry version 26.
DE SubName: Full=Putative Regulator of nonsense transcripts 1 {ECO:0000313|EMBL:KIZ03544.1};
DE EC=3.6.1.- {ECO:0000313|EMBL:KIZ03544.1};
GN ORFNames=MNEG_4409 {ECO:0000313|EMBL:KIZ03544.1};
OS Monoraphidium neglectum.
OC Eukaryota; Viridiplantae; Chlorophyta; core chlorophytes; Chlorophyceae;
OC CS clade; Sphaeropleales; Selenastraceae; Monoraphidium.
OX NCBI_TaxID=145388 {ECO:0000313|EMBL:KIZ03544.1, ECO:0000313|Proteomes:UP000054498};
RN [1] {ECO:0000313|EMBL:KIZ03544.1, ECO:0000313|Proteomes:UP000054498}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=SAG 48.87 {ECO:0000313|EMBL:KIZ03544.1,
RC ECO:0000313|Proteomes:UP000054498};
RX PubMed=24373495; DOI=10.1186/1471-2164-14-926;
RA Bogen C., Al-Dilaimi A., Albersmeier A., Wichmann J., Grundmann M.,
RA Rupp O., Lauersen K.J., Blifernez-Klassen O., Kalinowski J., Goesmann A.,
RA Mussgnug J.H., Kruse O.;
RT "Reconstruction of the lipid metabolism for the microalga Monoraphidium
RT neglectum from its genome sequence reveals characteristics suitable for
RT biofuel production.";
RL BMC Genomics 14:926-926(2013).
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DR EMBL; KK100830; KIZ03544.1; -; Genomic_DNA.
DR RefSeq; XP_013902563.1; XM_014047109.1.
DR AlphaFoldDB; A0A0D2L9S3; -.
DR STRING; 145388.A0A0D2L9S3; -.
DR GeneID; 25737286; -.
DR KEGG; mng:MNEG_4409; -.
DR OrthoDB; 294615at2759; -.
DR Proteomes; UP000054498; Unassembled WGS sequence.
DR GO; GO:0005737; C:cytoplasm; IEA:InterPro.
DR GO; GO:0005524; F:ATP binding; IEA:InterPro.
DR GO; GO:0016787; F:hydrolase activity; IEA:UniProtKB-KW.
DR GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR GO; GO:0003724; F:RNA helicase activity; IEA:InterPro.
DR GO; GO:0008270; F:zinc ion binding; IEA:UniProtKB-UniRule.
DR GO; GO:0000184; P:nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; IEA:InterPro.
DR CDD; cd21400; ZBD_UPF1-like; 1.
DR InterPro; IPR018999; UPF1_CH/ZBD.
DR Pfam; PF09416; UPF1_Zn_bind; 1.
DR PROSITE; PS51997; UPF1_CH_RICH; 1.
PE 4: Predicted;
KW Hydrolase {ECO:0000313|EMBL:KIZ03544.1};
KW Metal-binding {ECO:0000256|PROSITE-ProRule:PRU01341};
KW Reference proteome {ECO:0000313|Proteomes:UP000054498};
KW Zinc {ECO:0000256|PROSITE-ProRule:PRU01341};
KW Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU01341}.
FT DOMAIN 106..263
FT /note="Upf1"
FT /evidence="ECO:0000259|PROSITE:PS51997"
FT REGION 114..146
FT /note="C3H"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU01341"
FT REGION 128..156
FT /note="CC/SHH/C"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU01341"
FT REGION 174..204
FT /note="C4"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU01341"
SQ SEQUENCE 287 AA; 30580 MW; 8D99078E62507A44 CRC64;
MAFTQTNGLG FQTQDGMLTA NDGTAAGLTA AFHDFGTSQN DAYLQFTDFG HGASQSSLAW
TDGLGAAPQR QPQVPGAGYS IDGLTPSLNQ LRFDEGFDDA SSAQTPEQLP EWACAYCGIH
NPASVVKCVS TGKWFCNGRM GASGSCIVVH LVRSRCREVQ LHRDSPLGDA VLECYNSGAR
NIFVLGFVPV RSDNTVVLLA RDTPPNAPAV KDLGVDMSQW QPIVEDRMFV PWLVKPPGDD
ERLRARRLTP AQIGARRGSG LPAPGRAGAW GAPAPPRPAV EHACVCC
//
