ID A0A0D2Q6Y2_GOSRA Unreviewed; 751 AA.
AC A0A0D2Q6Y2;
DT 29-APR-2015, integrated into UniProtKB/TrEMBL.
DT 29-APR-2015, sequence version 1.
DT 27-MAR-2024, entry version 42.
DE RecName: Full=ABC transporter domain-containing protein {ECO:0008006|Google:ProtNLM};
GN ORFNames=B456_002G023500 {ECO:0000313|EMBL:KJB12541.1};
OS Gossypium raimondii (New World cotton).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium.
OX NCBI_TaxID=29730 {ECO:0000313|EMBL:KJB12541.1, ECO:0000313|Proteomes:UP000032304};
RN [1] {ECO:0000313|EMBL:KJB12541.1, ECO:0000313|Proteomes:UP000032304}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=23257886; DOI=10.1038/nature11798;
RA Paterson A.H., Wendel J.F., Gundlach H., Guo H., Jenkins J., Jin D.,
RA Llewellyn D., Showmaker K.C., Shu S., Udall J., Yoo M.J., Byers R.,
RA Chen W., Doron-Faigenboim A., Duke M.V., Gong L., Grimwood J., Grover C.,
RA Grupp K., Hu G., Lee T.H., Li J., Lin L., Liu T., Marler B.S., Page J.T.,
RA Roberts A.W., Romanel E., Sanders W.S., Szadkowski E., Tan X., Tang H.,
RA Xu C., Wang J., Wang Z., Zhang D., Zhang L., Ashrafi H., Bedon F.,
RA Bowers J.E., Brubaker C.L., Chee P.W., Das S., Gingle A.R., Haigler C.H.,
RA Harker D., Hoffmann L.V., Hovav R., Jones D.C., Lemke C., Mansoor S.,
RA ur Rahman M., Rainville L.N., Rambani A., Reddy U.K., Rong J.K.,
RA Saranga Y., Scheffler B.E., Scheffler J.A., Stelly D.M., Triplett B.A.,
RA Van Deynze A., Vaslin M.F., Waghmare V.N., Walford S.A., Wright R.J.,
RA Zaki E.A., Zhang T., Dennis E.S., Mayer K.F., Peterson D.G., Rokhsar D.S.,
RA Wang X., Schmutz J.;
RT "Repeated polyploidization of Gossypium genomes and the evolution of
RT spinnable cotton fibres.";
RL Nature 492:423-427(2012).
CC -!- SIMILARITY: Belongs to the ABC transporter superfamily. ABCD family.
CC Peroxisomal fatty acyl CoA transporter (TC 3.A.1.203) subfamily.
CC {ECO:0000256|ARBA:ARBA00008575}.
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DR EMBL; CM001741; KJB12541.1; -; Genomic_DNA.
DR RefSeq; XP_012452505.1; XM_012597051.1.
DR AlphaFoldDB; A0A0D2Q6Y2; -.
DR STRING; 29730.A0A0D2Q6Y2; -.
DR EnsemblPlants; KJB12541; KJB12541; B456_002G023500.
DR GeneID; 105774529; -.
DR Gramene; KJB12541; KJB12541; B456_002G023500.
DR KEGG; gra:105774529; -.
DR eggNOG; KOG0060; Eukaryota.
DR OMA; IHDMYLD; -.
DR OrthoDB; 7698at2759; -.
DR Proteomes; UP000032304; Chromosome 2.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0140359; F:ABC-type transporter activity; IEA:InterPro.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR CDD; cd03223; ABCD_peroxisomal_ALDP; 1.
DR Gene3D; 1.20.1560.10; ABC transporter type 1, transmembrane domain; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR InterPro; IPR003593; AAA+_ATPase.
DR InterPro; IPR011527; ABC1_TM_dom.
DR InterPro; IPR036640; ABC1_TM_sf.
DR InterPro; IPR003439; ABC_transporter-like_ATP-bd.
DR InterPro; IPR017871; ABC_transporter-like_CS.
DR InterPro; IPR027417; P-loop_NTPase.
DR PANTHER; PTHR11384:SF59; ATP-BINDING CASSETTE SUB-FAMILY D MEMBER; 1.
DR PANTHER; PTHR11384; ATP-BINDING CASSETTE, SUB-FAMILY D MEMBER; 1.
DR Pfam; PF06472; ABC_membrane_2; 1.
DR Pfam; PF00005; ABC_tran; 1.
DR SMART; SM00382; AAA; 1.
DR SUPFAM; SSF90123; ABC transporter transmembrane region; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR PROSITE; PS50929; ABC_TM1F; 1.
DR PROSITE; PS00211; ABC_TRANSPORTER_1; 1.
DR PROSITE; PS50893; ABC_TRANSPORTER_2; 1.
PE 3: Inferred from homology;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW Membrane {ECO:0000256|ARBA:ARBA00023136, ECO:0000256|SAM:Phobius};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Reference proteome {ECO:0000313|Proteomes:UP000032304};
KW Transmembrane {ECO:0000256|ARBA:ARBA00022692, ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|ARBA:ARBA00022989,
KW ECO:0000256|SAM:Phobius}; Transport {ECO:0000256|ARBA:ARBA00022448}.
FT TRANSMEM 118..138
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 158..177
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 231..253
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 259..282
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 119..402
FT /note="ABC transmembrane type-1"
FT /evidence="ECO:0000259|PROSITE:PS50929"
FT DOMAIN 460..750
FT /note="ABC transporter"
FT /evidence="ECO:0000259|PROSITE:PS50893"
FT REGION 25..50
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 63..83
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 751 AA; 84572 MW; B710C917986D1C5A CRC64;
MIVAQMALCS YPYLRLHTTT SPFEPSNGHH IHHHPVFSKP KRLETRNSNS NSNPLNIKCF
ASTSQSKSQS QSPPPLPPFK DEGEERKFSD LNMLFRRFWK VAAPYWFSDD KVQARLQLAG
VFALTLATTG ISVGFNFLGR DFFNALANKD EEQFTKQLLY YLCGFAGGIP FFVLRDYARE
TLSLRWRCWM TSYFMQRYLT DRTFYKIQSQ SIIDNPDQRI VDDLSSFTST ALSFSLTLFN
AAVDLISFSN ILYTIYPPLF VVLLLYSIGG TVISIFLGKG LVTLNFLQEK KEADFRYGLV
RVRENAESIA FYGGEDNELQ LLLQRFTSAF ENLTQLLISS RNLEFFTNGY RYLIQIVPAA
VVAPMYFSGK IEFGVINQSV SAFSHILGDV SLVVYQFQAI SAFSAVIDRL GEFDDILDSS
RSKSLSDPME YIDLTYSHVK GSQVLDSNGS TPPTTSPRLL DVENLTLKTP KSNSTLVRDL
SFAIDEKDNL LVVGPSGSGK TSLLRALAGL WNTGKGKITF YVEKAGDAQS PTSSEMAPVE
ENSANVNEEF GRPINSNSKS VFFLPQRPYM VLGSLRQQLL YPTWTEEVVV SDTTKPGGSL
PFLTQVPNSK NVSEKHRVPV PTTDDLTQVL EDVRIGYILS RFKGLDTVYE WSSVLSLGEQ
QRLAFARLLL SKPKLALLDE STSALDEVNE AHLYEKMKAA GITYISIGHR RTLYAYHSRV
LDISSADADS RQRNWNIKFI EQDTLHNFLK L
//
