ID A0A0D2Q7L2_GOSRA Unreviewed; 549 AA.
AC A0A0D2Q7L2;
DT 29-APR-2015, integrated into UniProtKB/TrEMBL.
DT 29-APR-2015, sequence version 1.
DT 24-JAN-2024, entry version 33.
DE RecName: Full=PAS domain-containing protein {ECO:0000259|PROSITE:PS50112};
GN ORFNames=B456_002G166800 {ECO:0000313|EMBL:KJB15244.1};
OS Gossypium raimondii (New World cotton).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium.
OX NCBI_TaxID=29730 {ECO:0000313|EMBL:KJB15244.1, ECO:0000313|Proteomes:UP000032304};
RN [1] {ECO:0000313|EMBL:KJB15244.1, ECO:0000313|Proteomes:UP000032304}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=23257886; DOI=10.1038/nature11798;
RA Paterson A.H., Wendel J.F., Gundlach H., Guo H., Jenkins J., Jin D.,
RA Llewellyn D., Showmaker K.C., Shu S., Udall J., Yoo M.J., Byers R.,
RA Chen W., Doron-Faigenboim A., Duke M.V., Gong L., Grimwood J., Grover C.,
RA Grupp K., Hu G., Lee T.H., Li J., Lin L., Liu T., Marler B.S., Page J.T.,
RA Roberts A.W., Romanel E., Sanders W.S., Szadkowski E., Tan X., Tang H.,
RA Xu C., Wang J., Wang Z., Zhang D., Zhang L., Ashrafi H., Bedon F.,
RA Bowers J.E., Brubaker C.L., Chee P.W., Das S., Gingle A.R., Haigler C.H.,
RA Harker D., Hoffmann L.V., Hovav R., Jones D.C., Lemke C., Mansoor S.,
RA ur Rahman M., Rainville L.N., Rambani A., Reddy U.K., Rong J.K.,
RA Saranga Y., Scheffler B.E., Scheffler J.A., Stelly D.M., Triplett B.A.,
RA Van Deynze A., Vaslin M.F., Waghmare V.N., Walford S.A., Wright R.J.,
RA Zaki E.A., Zhang T., Dennis E.S., Mayer K.F., Peterson D.G., Rokhsar D.S.,
RA Wang X., Schmutz J.;
RT "Repeated polyploidization of Gossypium genomes and the evolution of
RT spinnable cotton fibres.";
RL Nature 492:423-427(2012).
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DR EMBL; CM001741; KJB15244.1; -; Genomic_DNA.
DR RefSeq; XP_012467133.1; XM_012611679.1.
DR AlphaFoldDB; A0A0D2Q7L2; -.
DR EnsemblPlants; KJB15244; KJB15244; B456_002G166800.
DR GeneID; 105785569; -.
DR Gramene; KJB15244; KJB15244; B456_002G166800.
DR OrthoDB; 450390at2759; -.
DR Proteomes; UP000032304; Chromosome 2.
DR GO; GO:0009881; F:photoreceptor activity; IEA:UniProtKB-KW.
DR GO; GO:0009637; P:response to blue light; IEA:UniProt.
DR CDD; cd22154; F-box_AtADO-like; 1.
DR CDD; cd00130; PAS; 1.
DR Gene3D; 1.20.1280.50; -; 1.
DR Gene3D; 2.120.10.80; Kelch-type beta propeller; 1.
DR Gene3D; 3.30.450.20; PAS domain; 1.
DR InterPro; IPR036047; F-box-like_dom_sf.
DR InterPro; IPR001810; F-box_dom.
DR InterPro; IPR015915; Kelch-typ_b-propeller.
DR InterPro; IPR001610; PAC.
DR InterPro; IPR000014; PAS.
DR InterPro; IPR035965; PAS-like_dom_sf.
DR NCBIfam; TIGR00229; sensory_box; 1.
DR PANTHER; PTHR46175:SF2; ADAGIO PROTEIN 3; 1.
DR PANTHER; PTHR46175; BACTERIOOPSIN TRANSCRIPTIONAL ACTIVATOR; 1.
DR Pfam; PF12937; F-box-like; 1.
DR Pfam; PF13415; Kelch_3; 2.
DR Pfam; PF13418; Kelch_4; 1.
DR Pfam; PF13426; PAS_9; 1.
DR SMART; SM00086; PAC; 1.
DR SUPFAM; SSF81383; F-box domain; 1.
DR SUPFAM; SSF117281; Kelch motif; 1.
DR SUPFAM; SSF55785; PYP-like sensor domain (PAS domain); 1.
DR PROSITE; PS50112; PAS; 1.
PE 4: Predicted;
KW Chromophore {ECO:0000256|ARBA:ARBA00022991};
KW Kelch repeat {ECO:0000256|ARBA:ARBA00022441};
KW Photoreceptor protein {ECO:0000256|ARBA:ARBA00022543};
KW Receptor {ECO:0000256|ARBA:ARBA00023170};
KW Reference proteome {ECO:0000313|Proteomes:UP000032304};
KW Sensory transduction {ECO:0000256|ARBA:ARBA00022606}.
FT DOMAIN 72..127
FT /note="PAS"
FT /evidence="ECO:0000259|PROSITE:PS50112"
FT REGION 1..51
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1..30
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 549 AA; 61519 MW; 6DBB347C85FCE5EF CRC64;
MSKGEEVMQS SGKRQRFAKD EVKRQEMEEQ QQQEDDEEEE ESQLPKKPGL LYYPTTPTSF
VVSDALEPDF PIIYVNKVFE VFTGYRADEV LGRNCRFLQY RDQCAQRRHP LVDPFVVSEI
RRCLEEGIEF QGELLNFRKD GTPLVNILKL APIHDDDGIV THIIGIQVFS EAKLDLNRVS
YPVFKETCNQ QLDESAQYSH FSNPPFSQHR EICGILQLSD EVLAHNILSR LTPRDVASIG
SVCRRIRQLT KNEHVRKMVC QNAWGREVTG TLEMMTKKLG WGRLARELTT LEAVCWRKLT
VGGAVEPSRC NFSACAAGNR LVLFGGEGVN MQPMDDTFVL NLDAANPVWQ RVSVESSPPG
RWGHTLSCLN GSWLVVFGGC GRQGLLNDVF VLDLDAKQPT WKEVSGGAPP LPRSWHSSCT
IDGSKLVVSG GCTDAGVLLS DTYLLDLTTD KPTWKEIPTS WAPPSRLGHS LSVYGRTKIL
MFGGLAKSGN LRLRSGEAYT IDLEDEEPQW RQLDCSAFTS VGSQNAVGCT LLLSCFSWIL
RRRNHHGGH
//
