ID A0A0D2QDH4_GOSRA Unreviewed; 467 AA.
AC A0A0D2QDH4;
DT 29-APR-2015, integrated into UniProtKB/TrEMBL.
DT 29-APR-2015, sequence version 1.
DT 27-MAR-2024, entry version 32.
DE RecName: Full=Pentacotripeptide-repeat region of PRORP domain-containing protein {ECO:0008006|Google:ProtNLM};
GN ORFNames=B456_009G110100 {ECO:0000313|EMBL:KJB56147.1};
OS Gossypium raimondii (New World cotton).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium.
OX NCBI_TaxID=29730 {ECO:0000313|EMBL:KJB56147.1, ECO:0000313|Proteomes:UP000032304};
RN [1] {ECO:0000313|EMBL:KJB56147.1, ECO:0000313|Proteomes:UP000032304}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=23257886; DOI=10.1038/nature11798;
RA Paterson A.H., Wendel J.F., Gundlach H., Guo H., Jenkins J., Jin D.,
RA Llewellyn D., Showmaker K.C., Shu S., Udall J., Yoo M.J., Byers R.,
RA Chen W., Doron-Faigenboim A., Duke M.V., Gong L., Grimwood J., Grover C.,
RA Grupp K., Hu G., Lee T.H., Li J., Lin L., Liu T., Marler B.S., Page J.T.,
RA Roberts A.W., Romanel E., Sanders W.S., Szadkowski E., Tan X., Tang H.,
RA Xu C., Wang J., Wang Z., Zhang D., Zhang L., Ashrafi H., Bedon F.,
RA Bowers J.E., Brubaker C.L., Chee P.W., Das S., Gingle A.R., Haigler C.H.,
RA Harker D., Hoffmann L.V., Hovav R., Jones D.C., Lemke C., Mansoor S.,
RA ur Rahman M., Rainville L.N., Rambani A., Reddy U.K., Rong J.K.,
RA Saranga Y., Scheffler B.E., Scheffler J.A., Stelly D.M., Triplett B.A.,
RA Van Deynze A., Vaslin M.F., Waghmare V.N., Walford S.A., Wright R.J.,
RA Zaki E.A., Zhang T., Dennis E.S., Mayer K.F., Peterson D.G., Rokhsar D.S.,
RA Wang X., Schmutz J.;
RT "Repeated polyploidization of Gossypium genomes and the evolution of
RT spinnable cotton fibres.";
RL Nature 492:423-427(2012).
CC -!- SIMILARITY: Belongs to the PPR family. P subfamily.
CC {ECO:0000256|ARBA:ARBA00007626}.
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DR EMBL; CM001748; KJB56147.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A0D2QDH4; -.
DR STRING; 29730.A0A0D2QDH4; -.
DR EnsemblPlants; KJB56147; KJB56147; B456_009G110100.
DR Gramene; KJB56147; KJB56147; B456_009G110100.
DR eggNOG; KOG4197; Eukaryota.
DR OMA; LMIKVYS; -.
DR Proteomes; UP000032304; Chromosome 9.
DR GO; GO:0005739; C:mitochondrion; IEA:GOC.
DR GO; GO:0090617; P:mitochondrial mRNA 5'-end processing; IEA:EnsemblPlants.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 4.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 6.
DR PANTHER; PTHR47939; MEMBRANE-ASSOCIATED SALT-INDUCIBLE PROTEIN-LIKE; 1.
DR PANTHER; PTHR47939:SF3; REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED; 1.
DR Pfam; PF01535; PPR; 1.
DR Pfam; PF12854; PPR_1; 1.
DR Pfam; PF13041; PPR_2; 3.
DR PROSITE; PS51375; PPR; 6.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000032304};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT REPEAT 143..177
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 213..247
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 283..317
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 318..352
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 353..387
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 388..422
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
SQ SEQUENCE 467 AA; 53181 MW; B7EED1E280DCBD5B CRC64;
MTLQNFLNTL KTVKKSSAST LSPKHFQHLP DFISHFLKPA TPLDASALPS LTPTTFRDIL
SNPDLKASKC FRFFNFVANN QSLLSFKPHL QDHLILICRL LKARLFADAE AMLKTLSVDE
NLRYPFLVIA SAVENCCFES KVTTKLFNFM LKVYSDNGNF SEASKTFDYM KDNGIKINER
TCTVHLNTLK KADELGLVLD FFGQMVQSGL EISVYSLTCV IDGMCRNGDI KKAREIMEEM
SGRGIKPNVI TFNILIDSCV KRWDFEELDL VLGLMRKGGV GFNVETYKFL IDGYSSYWKI
EAAERLVMEM HDKGLRVDTY LYNLMINGYC KLGAIESVLL LLGRMRDRGV KPNADTFCPI
INWYSKVGGM EVAMKYVEEM QKMGFELDKV MYDMLIDRFC QNGMADEAFE LRIDMERKGF
QADIAVFNQM GEILCETYQT EKAKMLMNIM IKRGICPKAV SFTSAIS
//
