ID A0A0D2QMN1_GOSRA Unreviewed; 492 AA.
AC A0A0D2QMN1;
DT 29-APR-2015, integrated into UniProtKB/TrEMBL.
DT 29-APR-2015, sequence version 1.
DT 27-MAR-2024, entry version 24.
DE RecName: Full=PHD-type domain-containing protein {ECO:0000259|PROSITE:PS50016};
GN ORFNames=B456_009G249400 {ECO:0000313|EMBL:KJB59322.1};
OS Gossypium raimondii (New World cotton).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium.
OX NCBI_TaxID=29730 {ECO:0000313|EMBL:KJB59322.1, ECO:0000313|Proteomes:UP000032304};
RN [1] {ECO:0000313|EMBL:KJB59322.1, ECO:0000313|Proteomes:UP000032304}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=23257886; DOI=10.1038/nature11798;
RA Paterson A.H., Wendel J.F., Gundlach H., Guo H., Jenkins J., Jin D.,
RA Llewellyn D., Showmaker K.C., Shu S., Udall J., Yoo M.J., Byers R.,
RA Chen W., Doron-Faigenboim A., Duke M.V., Gong L., Grimwood J., Grover C.,
RA Grupp K., Hu G., Lee T.H., Li J., Lin L., Liu T., Marler B.S., Page J.T.,
RA Roberts A.W., Romanel E., Sanders W.S., Szadkowski E., Tan X., Tang H.,
RA Xu C., Wang J., Wang Z., Zhang D., Zhang L., Ashrafi H., Bedon F.,
RA Bowers J.E., Brubaker C.L., Chee P.W., Das S., Gingle A.R., Haigler C.H.,
RA Harker D., Hoffmann L.V., Hovav R., Jones D.C., Lemke C., Mansoor S.,
RA ur Rahman M., Rainville L.N., Rambani A., Reddy U.K., Rong J.K.,
RA Saranga Y., Scheffler B.E., Scheffler J.A., Stelly D.M., Triplett B.A.,
RA Van Deynze A., Vaslin M.F., Waghmare V.N., Walford S.A., Wright R.J.,
RA Zaki E.A., Zhang T., Dennis E.S., Mayer K.F., Peterson D.G., Rokhsar D.S.,
RA Wang X., Schmutz J.;
RT "Repeated polyploidization of Gossypium genomes and the evolution of
RT spinnable cotton fibres.";
RL Nature 492:423-427(2012).
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DR EMBL; CM001748; KJB59322.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A0D2QMN1; -.
DR EnsemblPlants; KJB59322; KJB59322; B456_009G249400.
DR Gramene; KJB59322; KJB59322; B456_009G249400.
DR OMA; YCINCTV; -.
DR Proteomes; UP000032304; Chromosome 9.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR Gene3D; 2.30.30.1150; -; 1.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 1.
DR InterPro; IPR019786; Zinc_finger_PHD-type_CS.
DR InterPro; IPR011011; Znf_FYVE_PHD.
DR InterPro; IPR001965; Znf_PHD.
DR InterPro; IPR019787; Znf_PHD-finger.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR PANTHER; PTHR47162; OS02G0192300 PROTEIN; 1.
DR PANTHER; PTHR47162:SF9; PHD FINGER PROTEIN EHD3-LIKE; 1.
DR Pfam; PF00628; PHD; 2.
DR SMART; SM00249; PHD; 3.
DR SUPFAM; SSF57903; FYVE/PHD zinc finger; 3.
DR PROSITE; PS01359; ZF_PHD_1; 2.
DR PROSITE; PS50016; ZF_PHD_2; 3.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Reference proteome {ECO:0000313|Proteomes:UP000032304};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00146}.
FT DOMAIN 211..261
FT /note="PHD-type"
FT /evidence="ECO:0000259|PROSITE:PS50016"
FT DOMAIN 322..376
FT /note="PHD-type"
FT /evidence="ECO:0000259|PROSITE:PS50016"
FT DOMAIN 372..422
FT /note="PHD-type"
FT /evidence="ECO:0000259|PROSITE:PS50016"
SQ SEQUENCE 492 AA; 55218 MW; 94CB6C6DAD0C1A0C CRC64;
MHQFLNGDEG GIRRCIQDAL LFHQENDCNV TVKDSDTCHE DKQNCSPQAG QIPNGTQHTA
EKLKGVISNG SYKELYPQTT TERCQRVFFD VIISEKFTSL CKLLLENFQG IKLDNLFHLS
LINSRMKEGE YERSPMLFAS DIQEVWRKLQ VLGSEMISLA KSLSNITSAS CSEQVGCSGG
SAEKEEHEFC TRESEILAKR EQIEACGVFK VFTCRFCGEK ADGKDCLVCD SCEEMYHVAC
IEPALKVIPP KSWYCASCTG NGMGSPHENC VICDRLNAPR TLNSNVADEN YNEHFETSTE
LEENSNCSVG NWLQLSPGSK TRLVCKICGG NFVKGEKLRS CEHPYCPNKY YHVTCLTMKQ
LKTYCSRWYC PSCLCRACLA DKDDDKIVLC DGCDAAYHIY CMKPPQTSIP SGKWFCRKCD
AGIQRIQRAK RAYESKLKMK GVGGKMAYGN LESSLNQREK EESDKSRGGM DMLLSAASSL
HFVEKLNANR KS
//
