ID A0A0D2T169_GOSRA Unreviewed; 985 AA.
AC A0A0D2T169;
DT 29-APR-2015, integrated into UniProtKB/TrEMBL.
DT 29-APR-2015, sequence version 1.
DT 08-NOV-2023, entry version 24.
DE RecName: Full=JmjC domain-containing protein {ECO:0008006|Google:ProtNLM};
GN ORFNames=B456_011G024000 {ECO:0000313|EMBL:KJB69443.1};
OS Gossypium raimondii (New World cotton).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium.
OX NCBI_TaxID=29730 {ECO:0000313|EMBL:KJB69443.1, ECO:0000313|Proteomes:UP000032304};
RN [1] {ECO:0000313|EMBL:KJB69443.1, ECO:0000313|Proteomes:UP000032304}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=23257886; DOI=10.1038/nature11798;
RA Paterson A.H., Wendel J.F., Gundlach H., Guo H., Jenkins J., Jin D.,
RA Llewellyn D., Showmaker K.C., Shu S., Udall J., Yoo M.J., Byers R.,
RA Chen W., Doron-Faigenboim A., Duke M.V., Gong L., Grimwood J., Grover C.,
RA Grupp K., Hu G., Lee T.H., Li J., Lin L., Liu T., Marler B.S., Page J.T.,
RA Roberts A.W., Romanel E., Sanders W.S., Szadkowski E., Tan X., Tang H.,
RA Xu C., Wang J., Wang Z., Zhang D., Zhang L., Ashrafi H., Bedon F.,
RA Bowers J.E., Brubaker C.L., Chee P.W., Das S., Gingle A.R., Haigler C.H.,
RA Harker D., Hoffmann L.V., Hovav R., Jones D.C., Lemke C., Mansoor S.,
RA ur Rahman M., Rainville L.N., Rambani A., Reddy U.K., Rong J.K.,
RA Saranga Y., Scheffler B.E., Scheffler J.A., Stelly D.M., Triplett B.A.,
RA Van Deynze A., Vaslin M.F., Waghmare V.N., Walford S.A., Wright R.J.,
RA Zaki E.A., Zhang T., Dennis E.S., Mayer K.F., Peterson D.G., Rokhsar D.S.,
RA Wang X., Schmutz J.;
RT "Repeated polyploidization of Gossypium genomes and the evolution of
RT spinnable cotton fibres.";
RL Nature 492:423-427(2012).
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC -!- CAUTION: Lacks conserved residue(s) required for the propagation of
CC feature annotation. {ECO:0000256|PROSITE-ProRule:PRU01002}.
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DR EMBL; CM001750; KJB69443.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A0D2T169; -.
DR EnsemblPlants; KJB69443; KJB69443; B456_011G024000.
DR Gramene; KJB69443; KJB69443; B456_011G024000.
DR Proteomes; UP000032304; Chromosome 11.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0032454; F:histone H3K9 demethylase activity; IEA:InterPro.
DR Gene3D; 2.60.120.650; Cupin; 1.
DR InterPro; IPR045109; JHDM2-like.
DR InterPro; IPR003347; JmjC_dom.
DR InterPro; IPR014977; WRC_dom.
DR InterPro; IPR001841; Znf_RING.
DR PANTHER; PTHR12549; JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN; 1.
DR PANTHER; PTHR12549:SF42; PROTEIN B160; 1.
DR Pfam; PF02373; JmjC; 1.
DR Pfam; PF08879; WRC; 1.
DR SMART; SM00558; JmjC; 1.
DR SUPFAM; SSF51197; Clavaminate synthase-like; 1.
DR PROSITE; PS51184; JMJC; 1.
DR PROSITE; PS51667; WRC; 1.
DR PROSITE; PS50089; ZF_RING_2; 1.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|PROSITE-ProRule:PRU00175};
KW Reference proteome {ECO:0000313|Proteomes:UP000032304};
KW Zinc {ECO:0000256|PROSITE-ProRule:PRU00175};
KW Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00175}.
FT DOMAIN 7..51
FT /note="WRC"
FT /evidence="ECO:0000259|PROSITE:PS51667"
FT DOMAIN 241..287
FT /note="RING-type"
FT /evidence="ECO:0000259|PROSITE:PS50089"
FT DOMAIN 680..939
FT /note="JmjC"
FT /evidence="ECO:0000259|PROSITE:PS51184"
FT REGION 124..154
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 138..152
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 985 AA; 111991 MW; 8E35BEF4CF12330D CRC64;
MEGEGAIPDH LRCNRTDGRQ WRCKRRVMEG KKLCELHHIQ GRHRQNKQKV PESLKMQRKK
RKKKVFEKNK LEIRAKLLKL ARPVKRKRVI GGESEALDEA VRKMKLKRGD LPLELIRMVL
KREAEKKKKK RKESECSDFD DDDDDDDDDE KGDLMRELPN GLMAISSSSP HFDNAGSCSG
SGSASGSGSV SGSCINVKVG ETDNNAVAIT RRRFRSKNIE PLPVGTLQNG ANLRRGRRIR
CHWCRKGGAP NLIKCSSCKQ QFFCLDCIKE HYFFKREEVQ VACPVCRGTC GCRACSVSQR
RDDECKEFLR DKIKVDKVLD FHYLICMLLP VFKQINQDQS VEIDVEAKIQ GKKLCDIQVQ
PAESGGNKEY CCSYCKTLIL DFHRSCPKCS YSLCLSCCRD IFQGNLFGTI KEVNCKCPKR
RKTCLPGICL SDRKSVRITR QTSDSRYSDS FVSLPSQKAP DGSVPISCPP SEFGGCGDGL
LDLRCILPQS WFKELEVSAE EIVGSYELPE AFDTFSCCSL CPATDDEAKR VKQLQEASRR
ENSNDNFLFY PTVLNIHGDN LEHFQKHWCK GHPVIFRNVL RTTALSWDPI FLFCSYLKNS
VAKAENEEPS KATTCSDWFE VEIGIKQLFL GSLRGLAQSS MCDEKLKLKG WLSSPLFQEQ
FPDHYSEIIQ SLPLREYMNP GSGILNIAAR LPQEITKPDL GPSVSISYCS SEELAQANSV
TNLCYGLCDM VNVLAHATDA PVCMKQLNKI RKLMKKKKFQ DERELAKTHL DQKMANEVKE
KSKSNGENIK VGLNAALHPC DTIHGSEALE DQEIFGKRTD LAKSCGAEWD VFRRQDVPKL
MEYLRKHSNE FGHTCGFQKH VVHPILDQNF FLDTSHKRRL KEEYEIEPWT FEQHVGEAII
IPAGCPYQIR NVKSCVNVVL DFVSPENVTE CIRLINEFRL LPDDHKAKAK KFEVEKMALY
RISAAIKEIR ELICSEFRSS AELSE
//
