ID A0A0D2UL01_GOSRA Unreviewed; 537 AA.
AC A0A0D2UL01;
DT 29-APR-2015, integrated into UniProtKB/TrEMBL.
DT 29-APR-2015, sequence version 1.
DT 13-SEP-2023, entry version 29.
DE RecName: Full=XS domain-containing protein {ECO:0008006|Google:ProtNLM};
GN ORFNames=B456_009G124400 {ECO:0000313|EMBL:KJB56540.1};
OS Gossypium raimondii (New World cotton).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium.
OX NCBI_TaxID=29730 {ECO:0000313|EMBL:KJB56540.1, ECO:0000313|Proteomes:UP000032304};
RN [1] {ECO:0000313|EMBL:KJB56540.1, ECO:0000313|Proteomes:UP000032304}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=23257886; DOI=10.1038/nature11798;
RA Paterson A.H., Wendel J.F., Gundlach H., Guo H., Jenkins J., Jin D.,
RA Llewellyn D., Showmaker K.C., Shu S., Udall J., Yoo M.J., Byers R.,
RA Chen W., Doron-Faigenboim A., Duke M.V., Gong L., Grimwood J., Grover C.,
RA Grupp K., Hu G., Lee T.H., Li J., Lin L., Liu T., Marler B.S., Page J.T.,
RA Roberts A.W., Romanel E., Sanders W.S., Szadkowski E., Tan X., Tang H.,
RA Xu C., Wang J., Wang Z., Zhang D., Zhang L., Ashrafi H., Bedon F.,
RA Bowers J.E., Brubaker C.L., Chee P.W., Das S., Gingle A.R., Haigler C.H.,
RA Harker D., Hoffmann L.V., Hovav R., Jones D.C., Lemke C., Mansoor S.,
RA ur Rahman M., Rainville L.N., Rambani A., Reddy U.K., Rong J.K.,
RA Saranga Y., Scheffler B.E., Scheffler J.A., Stelly D.M., Triplett B.A.,
RA Van Deynze A., Vaslin M.F., Waghmare V.N., Walford S.A., Wright R.J.,
RA Zaki E.A., Zhang T., Dennis E.S., Mayer K.F., Peterson D.G., Rokhsar D.S.,
RA Wang X., Schmutz J.;
RT "Repeated polyploidization of Gossypium genomes and the evolution of
RT spinnable cotton fibres.";
RL Nature 492:423-427(2012).
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DR EMBL; CM001748; KJB56540.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A0D2UL01; -.
DR EnsemblPlants; KJB56540; KJB56540; B456_009G124400.
DR Gramene; KJB56540; KJB56540; B456_009G124400.
DR Proteomes; UP000032304; Chromosome 9.
DR GO; GO:0080188; P:gene silencing by RNA-directed DNA methylation; IEA:InterPro.
DR CDD; cd12266; RRM_like_XS; 1.
DR Gene3D; 3.30.70.2890; XS domain; 1.
DR InterPro; IPR045177; FDM1-5/IDN2.
DR InterPro; IPR005380; XS_domain.
DR InterPro; IPR038588; XS_domain_sf.
DR InterPro; IPR005381; Znf-XS_domain.
DR PANTHER; PTHR21596:SF3; FACTOR OF DNA METHYLATION 1-RELATED; 1.
DR PANTHER; PTHR21596; RIBONUCLEASE P SUBUNIT P38; 1.
DR Pfam; PF03468; XS; 1.
DR Pfam; PF03470; zf-XS; 1.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|ARBA:ARBA00023054};
KW Reference proteome {ECO:0000313|Proteomes:UP000032304};
KW RNA-mediated gene silencing {ECO:0000256|ARBA:ARBA00023158}.
FT DOMAIN 43..85
FT /note="Zinc finger-XS"
FT /evidence="ECO:0000259|Pfam:PF03470"
FT DOMAIN 116..224
FT /note="XS"
FT /evidence="ECO:0000259|Pfam:PF03468"
FT REGION 1..22
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 351..373
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 351..365
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 537 AA; 62570 MW; FD7F65E866337633 CRC64;
MDSSSGEESD LSESEINEYK EKPYEEIRSG KYKVKALNGS LRCPFCAGKK KQDYKYKDLL
QHASGVGKGS ANRSAKQRAN HLALAKYLEI DLASEADETS RPTVPQAVDQ TPEQTELYVW
PWMGIIMNIV AESKNIDTLH DKGYWLKRFA KYKPINVQCF WNEVDLTGQA IVVFNSDWNG
FVNATQFEKA FESERHSKKH WNGQQSQLGS NIYGWCARAD DYQSDGPIGD YLRKVGKLQT
ISGIVQEAAQ DRNSVVANLT TKIDLTNENL DELQYKYNET TMSLSRMLEE KDRLHLAFIE
ETRKMQRLAR DNVRRILEEQ EKLNHELETK KRKIDNWTRE LNKRETLTER ERQKLDEEKK
KNNERNNSLQ LASMEQKKAD ENVLRLVEEQ KREKEEALKK ILLLEKQLDI KQKLEMEIED
LKGKLQVMKH LGQDDAAVQK KMEEMNNELQ EKIDDLQDLE STNKALIYKE RQSNDELQEA
RKVLIQVLPT LSWLKTELRL PKPWITMQTQ ATGHKINVLF LLCRVCQNCW VIALILD
//
