ID A0A0D3C7R3_BRAOL Unreviewed; 952 AA.
AC A0A0D3C7R3;
DT 29-APR-2015, integrated into UniProtKB/TrEMBL.
DT 29-APR-2015, sequence version 1.
DT 27-MAR-2024, entry version 37.
DE RecName: Full=Glutamate receptor {ECO:0000256|PIRNR:PIRNR037090};
GN Name=106295783 {ECO:0000313|EnsemblPlants:Bo5g005320.1};
OS Brassica oleracea var. oleracea.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica.
OX NCBI_TaxID=109376 {ECO:0000313|EnsemblPlants:Bo5g005320.1, ECO:0000313|Proteomes:UP000032141};
RN [1] {ECO:0000313|EnsemblPlants:Bo5g005320.1, ECO:0000313|Proteomes:UP000032141}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=cv. TO1000 {ECO:0000313|Proteomes:UP000032141};
RX PubMed=24916971; DOI=10.1186/gb-2014-15-6-r77;
RA Parkin I.A., Koh C., Tang H., Robinson S.J., Kagale S., Clarke W.E.,
RA Town C.D., Nixon J., Krishnakumar V., Bidwell S.L., Denoeud F., Belcram H.,
RA Links M.G., Just J., Clarke C., Bender T., Huebert T., Mason A.S.,
RA Pires J.C., Barker G., Moore J., Walley P.G., Manoli S., Batley J.,
RA Edwards D., Nelson M.N., Wang X., Paterson A.H., King G., Bancroft I.,
RA Chalhoub B., Sharpe A.G.;
RT "Transcriptome and methylome profiling reveals relics of genome dominance
RT in the mesopolyploid Brassica oleracea.";
RL Genome Biol. 15:R77-R77(2014).
RN [2] {ECO:0000313|EnsemblPlants:Bo5g005320.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (MAR-2015) to UniProtKB.
CC -!- FUNCTION: Glutamate-gated receptor that probably acts as non-selective
CC cation channel. {ECO:0000256|PIRNR:PIRNR037090}.
CC -!- SUBCELLULAR LOCATION: Membrane {ECO:0000256|ARBA:ARBA00004141}; Multi-
CC pass membrane protein {ECO:0000256|ARBA:ARBA00004141}.
CC -!- SIMILARITY: Belongs to the glutamate-gated ion channel (TC 1.A.10.1)
CC family. {ECO:0000256|ARBA:ARBA00008685, ECO:0000256|PIRNR:PIRNR037090}.
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DR RefSeq; XP_013587218.1; XM_013731764.1.
DR RefSeq; XP_013587219.1; XM_013731765.1.
DR RefSeq; XP_013587220.1; XM_013731766.1.
DR RefSeq; XP_013587221.1; XM_013731767.1.
DR AlphaFoldDB; A0A0D3C7R3; -.
DR EnsemblPlants; Bo5g005320.1; Bo5g005320.1; Bo5g005320.
DR GeneID; 106295783; -.
DR Gramene; Bo5g005320.1; Bo5g005320.1; Bo5g005320.
DR KEGG; boe:106295783; -.
DR eggNOG; KOG1052; Eukaryota.
DR HOGENOM; CLU_007358_0_1_1; -.
DR OMA; ENYHYIF; -.
DR OrthoDB; 1011589at2759; -.
DR Proteomes; UP000032141; Chromosome C5.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0015276; F:ligand-gated monoatomic ion channel activity; IEA:InterPro.
DR CDD; cd13686; GluR_Plant; 1.
DR CDD; cd19990; PBP1_GABAb_receptor_plant; 1.
DR Gene3D; 1.10.287.70; -; 1.
DR Gene3D; 3.40.50.2300; -; 2.
DR Gene3D; 3.40.190.10; Periplasmic binding protein-like II; 3.
DR InterPro; IPR001828; ANF_lig-bd_rcpt.
DR InterPro; IPR044440; GABAb_receptor_plant_PBP1.
DR InterPro; IPR019594; Glu/Gly-bd.
DR InterPro; IPR015683; Ionotropic_Glu_rcpt.
DR InterPro; IPR001320; Iontro_rcpt_C.
DR InterPro; IPR017103; Iontropic_Glu_rcpt_pln.
DR InterPro; IPR028082; Peripla_BP_I.
DR InterPro; IPR001638; Solute-binding_3/MltF_N.
DR PANTHER; PTHR18966:SF487; GLUTAMATE RECEPTOR 3.4; 1.
DR PANTHER; PTHR18966; IONOTROPIC GLUTAMATE RECEPTOR; 1.
DR Pfam; PF01094; ANF_receptor; 1.
DR Pfam; PF00060; Lig_chan; 1.
DR Pfam; PF10613; Lig_chan-Glu_bd; 1.
DR Pfam; PF00497; SBP_bac_3; 1.
DR PIRSF; PIRSF037090; Iontro_Glu-like_rcpt_pln; 1.
DR PRINTS; PR01176; GABABRECEPTR.
DR SMART; SM00079; PBPe; 1.
DR SUPFAM; SSF53822; Periplasmic binding protein-like I; 1.
DR SUPFAM; SSF53850; Periplasmic binding protein-like II; 1.
PE 3: Inferred from homology;
KW Disulfide bond {ECO:0000256|PIRSR:PIRSR037090-50};
KW Glycoprotein {ECO:0000256|ARBA:ARBA00023180};
KW Ion channel {ECO:0000256|ARBA:ARBA00023303, ECO:0000256|PIRNR:PIRNR037090};
KW Ion transport {ECO:0000256|ARBA:ARBA00023065,
KW ECO:0000256|PIRNR:PIRNR037090};
KW Ligand-gated ion channel {ECO:0000256|ARBA:ARBA00023286,
KW ECO:0000256|PIRNR:PIRNR037090};
KW Membrane {ECO:0000256|ARBA:ARBA00023136, ECO:0000256|PIRNR:PIRNR037090};
KW Receptor {ECO:0000256|ARBA:ARBA00023170, ECO:0000256|PIRNR:PIRNR037090};
KW Reference proteome {ECO:0000313|Proteomes:UP000032141};
KW Signal {ECO:0000256|ARBA:ARBA00022729, ECO:0000256|SAM:SignalP};
KW Transmembrane {ECO:0000256|ARBA:ARBA00022692, ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|ARBA:ARBA00022989,
KW ECO:0000256|SAM:Phobius};
KW Transport {ECO:0000256|ARBA:ARBA00022448, ECO:0000256|PIRNR:PIRNR037090}.
FT SIGNAL 1..25
FT /evidence="ECO:0000256|SAM:SignalP"
FT CHAIN 26..952
FT /note="Glutamate receptor"
FT /evidence="ECO:0000256|SAM:SignalP"
FT /id="PRO_5002269564"
FT TRANSMEM 609..627
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 639..657
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 669..693
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 851..874
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 488..830
FT /note="Ionotropic glutamate receptor C-terminal"
FT /evidence="ECO:0000259|SMART:SM00079"
FT REGION 930..952
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 931..952
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT DISULFID 779..834
FT /evidence="ECO:0000256|PIRSR:PIRSR037090-50"
SQ SEQUENCE 952 AA; 106165 MW; F7F7E97650BFEEC2 CRC64;
MMRGVSMVKA MIIVLLCVSF LWVVPEECAG KADFSRNSSS SSASHPLLKR PSSVNVGALF
TYDSFIGRAA KPAFKAAMDD VNADQTVLKG TKLNIVFQDS NCSGFIGTMG ALQLMETQVV
AAIGPQSSTI AHMISYVANE LHVPLLSFAA TDPTLSSLQY PYFLRTTQND HFQMQAVADF
VSYSGWRQVI AIFVDDECGR NGVLVLGDAL AKKRARISHK AAITPGADAT SIKDLLVSVN
LMASRVYVVH VNPDSGLNVF SVAKSLGMMG SGYVWIATDW LPTVLDSMGA VDAETTDVLQ
GVVAFRHYTA ENDAKRRFME RWRNLRPKEG LNSYALYAYD SVWLIARALD VFFGDNNRVT
FSNDPNLHKT KSSSLRLSAL SVFNEGERFL EIILGMNRIG LTGPIRFDSE RNRVNPAYEV
LNIEGTGPRR VGYWSNHSGL SVVPPETLYS KPPSTSTANQ RLYGIIWPGE VTKPPRGWVF
PNNGKPLKIA VPNRVSYKDY VSKDKNPPGV RGYCIDVFEA AIELLPYPVP RNYILYGDGK
KNPSYDNLIN EVVADNFDVA VGDITIVTNR TRFVDFTQPF IESGLVVVAP VKEAKSSPWS
FLKPFTIEMW AVTGAFFLFV GAIVWILEHR FNHEFRGPPR RQLITIFWFS FSTMFFSHRE
NTVSSLGRLV LIIWLFVVLI INSSYTASLT SILTVQQLTS RIEGIDSLIT SNEPIGVQDG
TFARNYLVNE LNISPHRIVP LRDEEHYLSA LQLGPKAGGV AAIVDELPYI EVLLTNSNCK
YRTVGQEFTR TGWGFAFQRD SPLAVDMSTA ILQLSEEGEL EKIHRKWLNY KHECSMQIQN
SETSQLSLKS FWGLFLICGV TCFIALTVFF WRVFWQYQRL LPDTGEEERA SEVTEASRSG
RGLRAPSFKE LVKIVDKREA EIKEILKQKS SNKLKSSQSG AGSSHSQHSE IS
//
