ID A0A0D3CGX7_BRAOL Unreviewed; 395 AA.
AC A0A0D3CGX7;
DT 29-APR-2015, integrated into UniProtKB/TrEMBL.
DT 29-APR-2015, sequence version 1.
DT 27-MAR-2024, entry version 34.
DE RecName: Full=Pentatricopeptide repeat-containing protein {ECO:0008006|Google:ProtNLM};
GN Name=106292978 {ECO:0000313|EnsemblPlants:Bo5g092920.1};
OS Brassica oleracea var. oleracea.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica.
OX NCBI_TaxID=109376 {ECO:0000313|EnsemblPlants:Bo5g092920.1, ECO:0000313|Proteomes:UP000032141};
RN [1] {ECO:0000313|EnsemblPlants:Bo5g092920.1, ECO:0000313|Proteomes:UP000032141}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=cv. TO1000 {ECO:0000313|Proteomes:UP000032141};
RX PubMed=24916971; DOI=10.1186/gb-2014-15-6-r77;
RA Parkin I.A., Koh C., Tang H., Robinson S.J., Kagale S., Clarke W.E.,
RA Town C.D., Nixon J., Krishnakumar V., Bidwell S.L., Denoeud F., Belcram H.,
RA Links M.G., Just J., Clarke C., Bender T., Huebert T., Mason A.S.,
RA Pires J.C., Barker G., Moore J., Walley P.G., Manoli S., Batley J.,
RA Edwards D., Nelson M.N., Wang X., Paterson A.H., King G., Bancroft I.,
RA Chalhoub B., Sharpe A.G.;
RT "Transcriptome and methylome profiling reveals relics of genome dominance
RT in the mesopolyploid Brassica oleracea.";
RL Genome Biol. 15:R77-R77(2014).
RN [2] {ECO:0000313|EnsemblPlants:Bo5g092920.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (MAR-2015) to UniProtKB.
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DR RefSeq; XP_013584106.1; XM_013728652.1.
DR AlphaFoldDB; A0A0D3CGX7; -.
DR STRING; 109376.A0A0D3CGX7; -.
DR EnsemblPlants; Bo5g092920.1; Bo5g092920.1; Bo5g092920.
DR GeneID; 106292978; -.
DR Gramene; Bo5g092920.1; Bo5g092920.1; Bo5g092920.
DR KEGG; boe:106292978; -.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_002706_0_3_1; -.
DR OMA; ITRQMFD; -.
DR OrthoDB; 399129at2759; -.
DR Proteomes; UP000032141; Chromosome C5.
DR GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR GO; GO:0009451; P:RNA modification; IEA:InterPro.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 2.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR045215; PPR_prot_At1g15510.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 1.
DR PANTHER; PTHR24015; OS07G0578800 PROTEIN-RELATED; 1.
DR PANTHER; PTHR24015:SF1910; PPR_LONG DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF01535; PPR; 3.
DR PROSITE; PS51375; PPR; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000032141};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT REPEAT 364..394
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
SQ SEQUENCE 395 AA; 44254 MW; C57C5524FDAEC5D3 CRC64;
MRTLELALSP PPASYIPSFN LISTTQSVGI NVQTSFDVQL LLRRPKHQNP EPVVVPQPQI
PIVRPQIPIP RCSTTDILRI MDSLSLPGNE DLYTCLAKES TSERDQRGAY ELTVHIMKSS
VRPRTTFLNR LLLLHVSCGR LDTARQVFDR MPHRDFHSWA IVILGYIEMG DFEEAALLFV
SMLKHQNAAS KITPWIMGCV LKASAMIRDL GLGQQLHGFC QKLGFIEEED SCLSGSLIRF
YGEFGCLEDA NLVLHQLSNA DTVVWAAKVS NDYREGEFQQ VIRDFIEMGK HGVQKNALVF
SSVLKASTWV SDGGRSGGGV HADAIKLGFD SDCLIRCRLI EMYGKYGKVK DAEKAFMSRE
DDTNVSCWNA MVAGYMQNGC YIEAIKLLYQ MKAHL
//
