ID   A0A0D3CSW1_BRAOL        Unreviewed;       250 AA.
AC   A0A0D3CSW1;
DT   29-APR-2015, integrated into UniProtKB/TrEMBL.
DT   29-APR-2015, sequence version 1.
DT   08-NOV-2023, entry version 26.
DE   RecName: Full=RNase H type-1 domain-containing protein {ECO:0008006|Google:ProtNLM};
OS   Brassica oleracea var. oleracea.
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica.
OX   NCBI_TaxID=109376 {ECO:0000313|EnsemblPlants:Bo6g058890.1, ECO:0000313|Proteomes:UP000032141};
RN   [1] {ECO:0000313|EnsemblPlants:Bo6g058890.1, ECO:0000313|Proteomes:UP000032141}
RP   NUCLEOTIDE SEQUENCE.
RC   STRAIN=cv. TO1000 {ECO:0000313|Proteomes:UP000032141};
RX   PubMed=24916971; DOI=10.1186/gb-2014-15-6-r77;
RA   Parkin I.A., Koh C., Tang H., Robinson S.J., Kagale S., Clarke W.E.,
RA   Town C.D., Nixon J., Krishnakumar V., Bidwell S.L., Denoeud F., Belcram H.,
RA   Links M.G., Just J., Clarke C., Bender T., Huebert T., Mason A.S.,
RA   Pires J.C., Barker G., Moore J., Walley P.G., Manoli S., Batley J.,
RA   Edwards D., Nelson M.N., Wang X., Paterson A.H., King G., Bancroft I.,
RA   Chalhoub B., Sharpe A.G.;
RT   "Transcriptome and methylome profiling reveals relics of genome dominance
RT   in the mesopolyploid Brassica oleracea.";
RL   Genome Biol. 15:R77-R77(2014).
RN   [2] {ECO:0000313|EnsemblPlants:Bo6g058890.1}
RP   IDENTIFICATION.
RG   EnsemblPlants;
RL   Submitted (MAR-2015) to UniProtKB.
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DR   AlphaFoldDB; A0A0D3CSW1; -.
DR   EnsemblPlants; Bo6g058890.1; Bo6g058890.1; Bo6g058890.
DR   Gramene; Bo6g058890.1; Bo6g058890.1; Bo6g058890.
DR   eggNOG; KOG1075; Eukaryota.
DR   HOGENOM; CLU_000680_14_0_1; -.
DR   Proteomes; UP000032141; Chromosome C6.
DR   GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR   GO; GO:0004523; F:RNA-DNA hybrid ribonuclease activity; IEA:InterPro.
DR   CDD; cd06222; RNase_H_like; 1.
DR   InterPro; IPR044730; RNase_H-like_dom_plant.
DR   InterPro; IPR002156; RNaseH_domain.
DR   InterPro; IPR026960; RVT-Znf.
DR   Pfam; PF13456; RVT_3; 1.
DR   Pfam; PF13966; zf-RVT; 1.
PE   4: Predicted;
KW   Reference proteome {ECO:0000313|Proteomes:UP000032141}.
FT   DOMAIN          2..54
FT                   /note="Reverse transcriptase zinc-binding"
FT                   /evidence="ECO:0000259|Pfam:PF13966"
FT   DOMAIN          127..225
FT                   /note="RNase H type-1"
FT                   /evidence="ECO:0000259|Pfam:PF13456"
SQ   SEQUENCE   250 AA;  29433 MW;  4E866F93D48F9AD5 CRC64;
     MCHLIWQLIT GQVAVTRNLV RQNMRGDKYC PRCGETEESV THAIFECPPA LQVWSLSATP
     ISPGTFPVAS VYTNMDYLFW RKNNILEPDQ DKDPYPWIIW YIWKARNDKL FRGIDRDPLE
     LVRLRRNGEN TQLMETRNFT RCESALHSEV EALRWKMENM LQHSRCQSFG TDCKELIAMI
     NEPQEWPSVA TELEKIETML ICFLDFKITH VPRVRNQFSD FLSKTARTFR RELLFIGCSI
     PFWLPRPAQA
//